Miyakogusa Predicted Gene
- Lj0g3v0113699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0113699.1 Non Chatacterized Hit- tr|B9T8F4|B9T8F4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,83.33,3e-19,UNCHARACTERIZED,NULL; LMBR1,LMBR1-like membrane protein;
seg,NULL,CUFF.6612.1
(411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 809 0.0
gnl|LJGI|FS321009 similar to UniRef100_A7R2J5 Cluster: Chromosom... 494 e-139
gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 inte... 381 e-105
gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 int... 274 4e-73
>gnl|LJGI|FS339411 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (22%)
Length = 775
Score = 809 bits (408), Expect = 0.0
Identities = 408/408 (100%)
Strand = Plus / Plus
Query: 1 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 329
Query: 61 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 389
Query: 121 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 449
Query: 181 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 509
Query: 241 cttacctgggctgtggtgccccttattcagggtttcgaagatgctggggatttcactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cttacctgggctgtggtgccccttattcagggtttcgaagatgctggggatttcactgta 569
Query: 301 tcagaaagattgaagactagtgtacatgttaacttggtcttctatctaattgtgggatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcagaaagattgaagactagtgtacatgttaacttggtcttctatctaattgtgggatcc 629
Query: 361 attggccttttcggacttgttcttctcattatgatgcacagaagctgg 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 attggccttttcggacttgttcttctcattatgatgcacagaagctgg 677
>gnl|LJGI|FS321009 similar to UniRef100_A7R2J5 Cluster: Chromosome undetermined
scaffold_431, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_431,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (3%)
Length = 587
Score = 494 bits (249), Expect = e-139
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 272
Query: 61 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 332
Query: 121 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 392
Query: 181 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 452
Query: 241 cttacctgg 249
|||||||||
Sbjct: 453 cttacctgg 461
>gnl|LJGI|TC60920 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (31%)
Length = 761
Score = 381 bits (192), Expect = e-105
Identities = 348/400 (87%)
Strand = Plus / Plus
Query: 1 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 60
||||||||||| |||||||||||||| || || |||| || |||||| || |||| |
Sbjct: 53 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 112
Query: 61 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 120
||||||||||| |||||||| || |||| |||||| || ||||| |||||||||||||||
Sbjct: 113 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 172
Query: 121 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 180
|| | |||||||| |||||||||||||||| || |||||||||||||| || |||||
Sbjct: 173 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 232
Query: 181 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 240
|| |||||||||||| || |||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 233 cagcttgagaatggaggcatttctttcctttggagctggtcttattggagtacgtttttg 292
Query: 241 cttacctgggctgtggtgccccttattcagggtttcgaagatgctggggatttcactgta 300
||||| ||||| || ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 293 cttacttgggcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 352
Query: 301 tcagaaagattgaagactagtgtacatgttaacttggtcttctatctaattgtgggatcc 360
||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| | |
Sbjct: 353 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 412
Query: 361 attggccttttcggacttgttcttctcattatgatgcaca 400
|||||||||| |||||| |||| ||||||||||||||||
Sbjct: 413 attggcctttgtggacttattctactcattatgatgcaca 452
>gnl|LJGI|DC597925 similar to UniRef100_Q6Z7V1 Cluster: LMBR1 integral membrane
protein-like; n=1; Oryza sativa Japonica Group|Rep:
LMBR1 integral membrane protein-like - Oryza sativa
subsp. japonica (Rice), partial (21%)
Length = 573
Score = 274 bits (138), Expect = 4e-73
Identities = 331/400 (82%), Gaps = 19/400 (4%)
Strand = Plus / Plus
Query: 1 atgtgggtgttttacctgatctcgctacctctaacaactggcatggtgcttttcaccttg 60
||||||||||| |||||||||||||| || || |||| || |||||| || |||| |
Sbjct: 52 atgtgggtgttctacctgatctcgctgcccctcacaatgggaatggtggttctcacgctc 111
Query: 61 aggtacttcgctggccctgatgttcctcgctacgtgcttttcactgttggatacacctgg 120
||||||||||| |||||||| || |||| |||||| || ||||| |||||||||||||||
Sbjct: 112 aggtacttcgccggccctgacgtccctctctacgtcctcttcaccgttggatacacctgg 171
Query: 121 ttttgctccctctctgtcatcatcctcgtccccgcggacatttgggcgacgatgtcttct 180
|| | |||||||| |||||||||||||||| || |||||||||||||| || |||||
Sbjct: 172 ttctcttccctctccatcatcatcctcgtccctgctgacatttgggcgacaatatcttcc 231
Query: 181 cactctgagaatggaggtatctctttcttttggagctggtcatattggagtacatttttg 240
|| |||||||||||| || |||||| ||||||||||||| ||||||||
Sbjct: 232 cagcttgagaatggaggcatttctttcctttggagctggtcttattggag---------- 281
Query: 241 cttacctgggctgtggtgccccttattcagggtttcgaagatgctggggatttcactgta 300
|| || ||||| |||||||||||||| |||||||||||||| |||||||||
Sbjct: 282 ---------gcggtcgtgcctcttattcagggttttgaagatgctggggacttcactgta 332
Query: 301 tcagaaagattgaagactagtgtacatgttaacttggtcttctatctaattgtgggatcc 360
||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| | |
Sbjct: 333 tcagaaagactgaagactagtgtacatgttaacttagtcttctatctaattttggggttc 392
Query: 361 attggccttttcggacttgttcttctcattatgatgcaca 400
|||||||||| |||||| |||| ||||||||||||||||
Sbjct: 393 attggcctttgtggacttattctactcattatgatgcaca 432