Miyakogusa Predicted Gene
- Lj0g3v0112879.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0112879.1 Non Chatacterized Hit- tr|F6H2A5|F6H2A5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,74.14,0.000000000000001,seg,NULL; PROTEIN_KINASE_DOM,Protein
kinase, catalytic domain; EGF_3,Epidermal growth factor-like
do,CUFF.6611.1
(1605 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-... 1209 0.0
gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Ch... 82 1e-14
gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome... 62 1e-08
gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Ch... 58 2e-07
>gnl|LJGI|FS320258 weakly similar to UniRef100_Q01963 Cluster: S-locus receptor kinase
precursor; n=2; Brassica napus|Rep: S-locus receptor
kinase precursor - Brassica napus var. napus, partial
(14%)
Length = 744
Score = 1209 bits (610), Expect = 0.0
Identities = 613/614 (99%)
Strand = Plus / Plus
Query: 1 atgtccattctccatggtatgcttcttatttccaacctactattgttgttctctcaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgtccattctccatggtatgcttcttatttccaacctactattgttgttctctcaattc 190
Query: 61 acgtttgcaacagacaccattaccaaccttgactcacttcctgatgatggaaccaccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 acgtttgcaacagacaccattaccaaccttgactcacttcctgatgatggaaccaccttg 250
Query: 121 gtttcaaacgatggaacctttgagctgggtttcttcaatccaggcagctcctcaaaccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gtttcaaacgatggaacctttgagctgggtttcttcaatccaggcagctcctcaaaccgc 310
Query: 181 tatgtaggaatctggtacaagaacatccaagttagaacagttgtttgggttgccaaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tatgtaggaatctggtacaagaacatccaagttagaacagttgtttgggttgccaaccgt 370
Query: 241 gacaatccaatcaaagacaactccagcaagttgatcataagccaagatggaaaccttgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gacaatccaatcaaagacaactccagcaagttgatcataagccaagatggaaaccttgta 430
Query: 301 cttctcaacaaaaacaactcaattctctggtcaacaaacacaactgcgaaggcggcgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cttctcaacaaaaacaactcaattctctggtcaacaaacacaactgcgaaggcggcgagt 490
Query: 361 cccgttgcgcagctcttagacactggaaatttaatagtcagagatgagaaagacaacaac 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cccgttgcgcagcccttagacactggaaatttaatagtcagagatgagaaagacaacaac 550
Query: 421 agcaacaatgaagaaagtttcttatggcagagctttgatcatccttgtgatacactgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 agcaacaatgaagaaagtttcttatggcagagctttgatcatccttgtgatacactgtta 610
Query: 481 ccaggtatgaagattggatgggacagaaaatctggaattaacaggcttttcactgcttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ccaggtatgaagattggatgggacagaaaatctggaattaacaggcttttcactgcttgg 670
Query: 541 aaaaattgggatgatccatcttcagggaacttaacagcagccacggtgcttaccaggaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaaaattgggatgatccatcttcagggaacttaacagcagccacggtgcttaccaggaat 730
Query: 601 cctgaatgggtaat 614
||||||||||||||
Sbjct: 731 cctgaatgggtaat 744
>gnl|LJGI|FS326382 weakly similar to UniRef100_A7P155 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 764
Score = 81.8 bits (41), Expect = 1e-14
Identities = 109/131 (83%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 115 accttggtttcaaacgatggaacctttgagctgggtttcttcaatccagg---cagctcc 171
|||||||| ||||| |||||||||||||| | |||||||||| |||||| || | |
Sbjct: 114 accttggtctcaaaagatggaacctttgaaattggtttcttcagtccaggtaacaacaac 173
Query: 172 tcaaaccgctatgtaggaatctggtacaagaacatccaagttagaacagttgtttgggtt 231
|||||||||| ||||||| |||||||| || || | ||||| ||| ||||||||||||
Sbjct: 174 acaaaccgctacctaggaatatggtacaaaaagattccagttacaactgttgtttgggtt 233
Query: 232 gccaaccgtga 242
|||||||||||
Sbjct: 234 gccaaccgtga 244
Score = 58.0 bits (29), Expect = 2e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 445 tggcagagctttgatcatccttgtgatacactgttaccaggtatgaagattggatgg 501
||||||||||||||| ||||||||||||| | || |||| |||||||||||||||
Sbjct: 444 tggcagagctttgattatccttgtgatacttttctagcaggaatgaagattggatgg 500
>gnl|LJGI|TC65334 similar to UniRef100_A7P186 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1193
Score = 61.9 bits (31), Expect = 1e-08
Identities = 63/73 (86%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 1522 gaaggtggttttgggccagtattcaaggga---ttgataggtggacaagagattgcggtt 1578
|||||||| ||||| ||||||| ||||||| ||||||| |||||||||||| || ||
Sbjct: 6 gaaggtggctttggaccagtatacaagggaatgttgatagatggacaagagatagctgtg 65
Query: 1579 aaaaggctttcaa 1591
|||||||||||||
Sbjct: 66 aaaaggctttcaa 78
>gnl|LJGI|FS319460 weakly similar to UniRef100_A7P197 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 729
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 443 tatggcagagctttgatcatccttgtgatacactgttaccaggtatgaa 491
|||||||||||||||| | |||||||| |||||||||||||| |||||
Sbjct: 477 tatggcagagctttgactacccttgtgacacactgttaccaggaatgaa 525