Miyakogusa Predicted Gene

Lj0g3v0112609.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0112609.1 Non Chatacterized Hit- tr|B9R7S1|B9R7S1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.34,0.0000000000001,seg,NULL,CUFF.6538.1
         (2016 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP039891 similar to UniRef100_A7NTE4 Cluster: Chromosom...  1098   0.0  

>gnl|LJGI|BP039891 similar to UniRef100_A7NTE4 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 583

 Score = 1098 bits (554), Expect = 0.0
 Identities = 575/583 (98%), Gaps = 1/583 (0%)
 Strand = Plus / Plus

                                                                        
Query: 779  tggtgagcccatcttgtgtgaatcttctggaaaataattctgaactgagctgcgaccagt 838
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tggtgagcccatcttgtgtgaatcttctggaaaataattctgaactgagctgcgaccagt 60

                                                                        
Query: 839  ctccaacctttccagcaatagaatttgaagatcataactctgatattagtggcatccaac 898
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctccaacctttccagcaatagaatttgaagatcataactctgatattagtggcatccaac 120

                                                                        
Query: 899  ttgatgatgacattgacactccagtctcaccacctagcatatctactcagaaagactttg 958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ttgatgatgacattgacactccagtctcaccacctagcatatctactcagaaagactttg 180

                                                                        
Query: 959  agtgcataaatctagagtgcattgatgatagtacnnnnnnn-ggtagctgctacaaagat 1017
            ||||||||||||||||||||||||||||||||||        ||||||||||||||||||
Sbjct: 181  agtgcataaatctagagtgcattgatgatagtacttttttttggtagctgctacaaagat 240

                                                                        
Query: 1018 gaatttacagctggtgctgaggtacaggaaaaacccagctctagtattgaacatgacctc 1077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gaatttacagctggtgctgaggtacaggaaaaacccagctctagtattgaacatgacctc 300

                                                                        
Query: 1078 aatccagaagaatgtccagtttcatgctcagatggttcacctgaatatgaggagaagcaa 1137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aatccagaagaatgtccagtttcatgctcagatggttcacctgaatatgaggagaagcaa 360

                                                                        
Query: 1138 tcatttgcttctgtgcttgatgatcaaaagagacatgtcaatgaagctattgatgaattg 1197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tcatttgcttctgtgcttgatgatcaaaagagacatgtcaatgaagctattgatgaattg 420

                                                                        
Query: 1198 acttcttgggatgatcttaaaggtagtccaaagctgcatagtcctgaaaggctattatca 1257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  acttcttgggatgatcttaaaggtagtccaaagctgcatagtcctgaaaggctattatca 480

                                                                        
Query: 1258 accagaaaggcaatttcaccctcttctcaggaaaagctttgtaaagccatggagtccatg 1317
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  accagaaaggcaatttcaccctcttctcaggaaaagctttgtaaagccatggagtccatg 540

                                                       
Query: 1318 gataattataacaatctgaaaagcaggagtagattatactttc 1360
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  gataattataacaatctgaaaagcaggagtagattatactttc 583