Miyakogusa Predicted Gene

Lj0g3v0112419.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0112419.1 Non Chatacterized Hit- tr|C0JP24|C0JP24_LOTJA
Putative basic helix-loop-helix protein BHLH6
OS=Lotus,32.2,0.011,seg,NULL,CUFF.6523.1
         (562 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS349732                                                     936   0.0  

>gnl|LJGI|FS349732 
          Length = 698

 Score =  936 bits (472), Expect = 0.0
 Identities = 478/480 (99%)
 Strand = Plus / Minus

                                                                       
Query: 83  gggggatttctttgtacttatctgtctcttctgttgttgctggtgatggtggtgggtgcg 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gggggatttctttgtacttatctgtctcttctgttgttgctggtgatggtggtgggtgcg 639

                                                                       
Query: 143 ttgctgattttgacagtgttgagggggaggaggttccatgtgactttgttgttgaacctc 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttgctgattttgacagtgttgagggggaggaggttccatgtgactttgttgttgaacctc 579

                                                                       
Query: 203 caaaggtttcctcccgtcgtcgagggaggccaaaaaagggtgatgcaggtggtttagttc 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caaaggtttcctcccgtcgtcgagggaggccaaaaaagggtgatgcaggtggtttagttc 519

                                                                       
Query: 263 cggaggaaggggtggtcagtggtagttgccccattttgcaggctccccgcccccgtgggc 322
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 518 cggaggaaggggtggtcagtggtagttgccccattttgcaggctccccacccccgtgggc 459

                                                                       
Query: 323 gacccaggaaagtgaagaaaggtcgtaagcctcgtctgttgccctcggcccctttggcta 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gacccaggaaagtgaagaaaggtcgtaagcctcgtctgttgccctcggcccctttggcta 399

                                                                       
Query: 383 ttgtcgagggtgatggctcttcctttattgcggcccctccttcgatttgtccggcgcctt 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttgtcgagggtgatggctcttcctttattgcggcccctccttcgatttgtccggcgcctt 339

                                                                       
Query: 443 tgcctcctgagaaagctcctggtggatgttattggactcgagtcaaggcggcgtggacgg 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcctcctgagaaagctcctggtggatgttattggactcgagtcaaggcggcgtggacgg 279

                                                                       
Query: 503 ttggaaaacttttgggttgctcatttgacggtggagatgaggcggctattcgcgattaga 562
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 ttggaaaacttttgggttgctcatttgacggtggagacgaggcggctattcgcgattaga 219