Miyakogusa Predicted Gene
- Lj0g3v0112069.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0112069.1 Non Chatacterized Hit- tr|K3XIB4|K3XIB4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001636,44.04,0.0000000000003,B-Box-type zinc finger,Zinc finger,
B-box; FAMILY NOT NAMED,NULL; seg,NULL; zf-B_box,Zinc finger,
B-,CUFF.6501.1
(882 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67647 similar to UniRef100_A7P279 Cluster: Chromosome... 1683 0.0
gnl|LJGI|BI420942 similar to UniRef100_A7P279 Cluster: Chromosom... 329 2e-89
gnl|LJGI|TC68207 similar to UniRef100_A7P279 Cluster: Chromosome... 208 4e-53
gnl|LJGI|DC593649 similar to UniRef100_A7P279 Cluster: Chromosom... 190 1e-47
>gnl|LJGI|TC67647 similar to UniRef100_A7P279 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 1451
Score = 1683 bits (849), Expect = 0.0
Identities = 872/882 (98%)
Strand = Plus / Plus
Query: 1 atgaagattcagtgtaacgtgtgtgaaggtgcggaggcgaaggttctgtgctgtgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atgaagattcagtgtaacgtgtgtgaaggtgcggaggcgaaggttctgtgctgtgctgat 259
Query: 61 gaggcagcgctgtgttgggattgtgatgagaaggttcatgctgctaataaactcgctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaggcagcgctgtgttgggattgtgatgagaaggttcatgctgctaataaactcgctagc 319
Query: 121 aagcaccagagagttcctctttctctctcttcctctcatatgcctaaatgtgatatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagcaccagagagttcctctttctctctcttcctctcatatgcctaaatgtgatatttgc 379
Query: 181 caggaagcatttggctattttttctgtctagaggatcgagctctactttgcagaaaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caggaagcatttggctattttttctgtctagaggatcgagctctactttgcagaaaatgt 439
Query: 241 gatttgtcgatacacactgcaaatgcatatgtctctggtcatcaaagatttctactcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gatttgtcgatacacactgcaaatgcatatgtctctggtcatcaaagatttctactcact 499
Query: 301 ggtgtaagagtaggccttgaagctacagaacctggggcttcctcaacttctttgaagtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggtgtaagagtaggccttgaagctacagaacctggggcttcctcaacttctttgaagtca 559
Query: 361 gattcgggagagaaaaattctgatacgaagtcttcttctgtctccagaaaggtttctgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gattcgggagagaaaaattctgatacgaagtcttcttctgtctccagaaaggtttctgca 619
Query: 421 atgcttcagtcatcagattacaatgaagtgttacccactgaagttggaggatttggggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgcttcagtcatcagattacaatgaagtgttacccactgaagttggaggatttggggag 679
Query: 481 tttccaccagctaaggcgtcttatggtggtggttctacagctggaaacatctcacagtgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttccaccagctaaggcgtcttatggtggtggttctacagctggaaacatctcacagtgg 739
Query: 541 tcaattgatgannnnnnngggattaatgaatttagtcagaactataattacatggatgga 600
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttaattgatgatttttttgggattaatgaatttagtcagaactataattacatggatgga 799
Query: 601 tcatcacgggctgacagttgtaagcttggggattctgattctccttttttaagatccggt 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcatcacgggctgacagtggtaagcttggggattctgattctccttttttaagatccggt 859
Query: 661 gaagacgaaatggaggatgatgactgcttgggacgtgttccagattcatccttgtcagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaagacgaaatggaggatgatgactgcttgggacgtgttccagattcatccttgtcagtt 919
Query: 721 cctcagattccatccccacctacagcttctggtttacactggccaaaaaaccctcaatat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 cctcagattccatccccacctacagcttctggtttacactggccaaaaaaccctcaatat 979
Query: 781 tcatctgatagtggcctttttgttcctgacatatctttttctagcatgcaacggccacag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 tcatctgatagtggcctttttgttcctgacatatctttttctagcatgcaacggccacag 1039
Query: 841 agtagtagtattttttcaagaccacacaggcatatttaattt 882
||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1040 agtagtagtattttttcaagaccacgcaggcatatttaattt 1081
>gnl|LJGI|BI420942 similar to UniRef100_A7P279 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 476
Score = 329 bits (166), Expect = 2e-89
Identities = 169/170 (99%)
Strand = Plus / Plus
Query: 1 atgaagattcagtgtaacgtgtgtgaaggtgcggaggcgaaggttctgtgctgtgctgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atgaagattcagtgtaacgtgtgtgaaggtgcggaggcgaaggttctgtgctgtgctgat 366
Query: 61 gaggcagcgctgtgttgggattgtgatgagaaggttcatgctgctaataaactcgctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaggcagcgctgtgttgggattgtgatgagaaggttcatgctgctaataaactcgctagc 426
Query: 121 aagcaccagagagttcctctttctctctcttcctctcatatgcctaaatg 170
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 427 aagcaccagagagctcctctttctctctcttcctctcatatgcctaaatg 476
>gnl|LJGI|TC68207 similar to UniRef100_A7P279 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 784
Score = 208 bits (105), Expect = 4e-53
Identities = 135/145 (93%)
Strand = Plus / Plus
Query: 27 aggtgcggaggcgaaggttctgtgctgtgctgatgaggcagcgctgtgttgggattgtga 86
||||| |||||||||||||||||| |||||||||||||| ||||| |||||| | |||||
Sbjct: 547 aggtgtggaggcgaaggttctgtgttgtgctgatgaggcggcgctatgttggaaatgtga 606
Query: 87 tgagaaggttcatgctgctaataaactcgctagcaagcaccagagagttcctctttctct 146
| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 607 taagaaggttcacgctgctaataaactctctagaaagcaccagagagttcctctttctct 666
Query: 147 ctcttcctctcatatgcctaaatgt 171
|||||||||||||||||||||||||
Sbjct: 667 ctcttcctctcatatgcctaaatgt 691
>gnl|LJGI|DC593649 similar to UniRef100_A7P279 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 542
Score = 190 bits (96), Expect = 1e-47
Identities = 123/132 (93%)
Strand = Plus / Plus
Query: 40 aaggttctgtgctgtgctgatgaggcagcgctgtgttgggattgtgatgagaaggttcat 99
||||||||||| |||||||||||||| ||||| |||||| | |||||| ||||||||||
Sbjct: 16 aaggttctgtgttgtgctgatgaggcggcgctatgttggaaatgtgataagaaggttcac 75
Query: 100 gctgctaataaactcgctagcaagcaccagagagttcctctttctctctcttcctctcat 159
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gctgctaataaactctctagaaagcaccagagagttcctctttctctctcttcctctcat 135
Query: 160 atgcctaaatgt 171
||||||||||||
Sbjct: 136 atgcctaaatgt 147