Miyakogusa Predicted Gene
- Lj0g3v0111419.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0111419.1 Non Chatacterized Hit- tr|Q8H043|Q8H043_ORYSJ
Putative uncharacterized protein OJ1263H11.13
OS=Oryza,26.46,2e-18,seg,NULL; coiled-coil,NULL; FAMILY NOT
NAMED,NULL; Remorin_C,Remorin, C-terminal,CUFF.6445.1
(1824 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n... 985 0.0
gnl|LJGI|AV407385 similar to UniRef100_A7NTX3 Cluster: Chromosom... 775 0.0
gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin... 188 8e-47
gnl|LJGI|TC70828 similar to UniRef100_A7NTX3 Cluster: Chromosome... 82 1e-14
gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosom... 76 9e-13
gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome... 76 9e-13
gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome... 58 2e-07
gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome... 58 2e-07
>gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine max|Rep:
Remorin - Glycine max (Soybean), partial (31%)
Length = 874
Score = 985 bits (497), Expect = 0.0
Identities = 500/501 (99%)
Strand = Plus / Plus
Query: 1324 ctcactgatttgcacagtgtctctttctctaaaatggatgtcagagatgtccaggtagat 1383
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcactgatttgcacagtgtctccttctctaaaatggatgtcagagatgtccaggtagat 60
Query: 1384 gaacgtgtaaccatgacaaggtggtccaagaaacacagggccctattctccggtagaggt 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaacgtgtaaccatgacaaggtggtccaagaaacacagggccctattctccggtagaggt 120
Query: 1444 tcagaaaatgttgacagctggaagaagaaagaaacaagcactcaaccttcatcttgggac 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcagaaaatgttgacagctggaagaagaaagaaacaagcactcaaccttcatcttgggac 180
Query: 1504 atttctgaaaggccaaagactgtttcaaagtctaaaagggaggaagccaaaataactgca 1563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttctgaaaggccaaagactgtttcaaagtctaaaagggaggaagccaaaataactgca 240
Query: 1564 tgggagaacctgcaaaaggcaaaagctgaggcagcaatacggaaattagagatgaaatta 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgggagaacctgcaaaaggcaaaagctgaggcagcaatacggaaattagagatgaaatta 300
Query: 1624 gaaaagaagcgagcatcctctatggataagattatgaacaagctgaggttggctcagaaa 1683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaaagaagcgagcatcctctatggataagattatgaacaagctgaggttggctcagaaa 360
Query: 1684 aaagctcaggaaatgaggagttcagctttagccaaccaggcccatcaagttactagaact 1743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagctcaggaaatgaggagttcagctttagccaaccaggcccatcaagttactagaact 420
Query: 1744 tctcacaaggttatatcatttcgtagaactggtcagatgggttctttaagtggttgtttc 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctcacaaggttatatcatttcgtagaactggtcagatgggttctttaagtggttgtttc 480
Query: 1804 acctgtcacgccttctaagct 1824
|||||||||||||||||||||
Sbjct: 481 acctgtcacgccttctaagct 501
>gnl|LJGI|AV407385 similar to UniRef100_A7NTX3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 391
Score = 775 bits (391), Expect = 0.0
Identities = 391/391 (100%)
Strand = Plus / Plus
Query: 514 gcttcgttagatctgaacaatgccaatgccattgggactatttcttcgcctcgattggga 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttcgttagatctgaacaatgccaatgccattgggactatttcttcgcctcgattggga 60
Query: 574 ggggttggagctttgaagaagagctcgatttcgtctcggaggtctggcactggcaccggc 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggttggagctttgaagaagagctcgatttcgtctcggaggtctggcactggcaccggc 120
Query: 634 attggcacatttccgagtcctggaacaccaaactatcgtcaaggtggtgttgcaatgcaa 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attggcacatttccgagtcctggaacaccaaactatcgtcaaggtggtgttgcaatgcaa 180
Query: 694 aaggggtggagctccgagcgggttccttcttcgcatacaagtgctgctcgcaagcaggtg 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggggtggagctccgagcgggttccttcttcgcatacaagtgctgctcgcaagcaggtg 240
Query: 754 ggtgcagctttgttgcctttgagcaatgggagaacgttgccttccaaatgggaagatgct 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtgcagctttgttgcctttgagcaatgggagaacgttgccttccaaatgggaagatgct 300
Query: 814 gagaggtggattctgagtcctgtgtctggtgatggcactggaagggcatccattgcggcg 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagaggtggattctgagtcctgtgtctggtgatggcactggaagggcatccattgcggcg 360
Query: 874 gcgccgcagaggaagctaaagtcaaagagcg 904
|||||||||||||||||||||||||||||||
Sbjct: 361 gcgccgcagaggaagctaaagtcaaagagcg 391
>gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine max|Rep:
Remorin - Glycine max (Soybean), partial (17%)
Length = 441
Score = 188 bits (95), Expect = 8e-47
Identities = 218/259 (84%)
Strand = Plus / Minus
Query: 1547 aagccaaaataactgcatgggagaacctgcaaaaggcaaaagctgaggcagcaatacgga 1606
|||||||||| || |||||||||||| |||| ||||||||||||| ||||||| | ||||
Sbjct: 441 aagccaaaatcacagcatgggagaacttgcagaaggcaaaagctgtggcagcagttcgga 382
Query: 1607 aattagagatgaaattagaaaagaagcgagcatcctctatggataagattatgaacaagc 1666
|| |||||||||| || ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 381 aactagagatgaagttggaaaagaggcgagcgtcctctatggataagattatgaacaagc 322
Query: 1667 tgaggttggctcagaaaaaagctcaggaaatgaggagttcagctttagccaaccaggccc 1726
| || ||||| | | |||||| || |||||||| ||||| | || | ||||||| |
Sbjct: 321 ttagattggccaaaacaaaagcccaagaaatgagaagttctgtttcacccaaccaaactg 262
Query: 1727 atcaagttactagaacttctcacaaggttatatcatttcgtagaactggtcagatgggtt 1786
|||||||| |||||||||||||||| | |||||||| |||||| | |||||| |||
Sbjct: 261 atcaagttgtaagaacttctcacaaggcttcatcatttcttagaaccagccagatgcgtt 202
Query: 1787 ctttaagtggttgtttcac 1805
| |||||||||||||||||
Sbjct: 201 ccttaagtggttgtttcac 183
>gnl|LJGI|TC70828 similar to UniRef100_A7NTX3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 850
Score = 81.8 bits (41), Expect = 1e-14
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 82 agccctgactccgtcatcttcactctcgaatccaacttgagcctcttctcctccgcttcc 141
||||| ||||||| | |||||||||||||||||||| | |||||||||||||| ||||||
Sbjct: 195 agccccgactccgccgtcttcactctcgaatccaacctcagcctcttctcctctgcttcc 254
Query: 142 gccagcgtcgatcgctgctccttcg 166
||| ||| ||||| ||||| ||||
Sbjct: 255 gcctccgttgatcgatgctcattcg 279
>gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 456
Score = 75.8 bits (38), Expect = 9e-13
Identities = 95/114 (83%)
Strand = Plus / Minus
Query: 1543 gaggaagccaaaataactgcatgggagaacctgcaaaaggcaaaagctgaggcagcaata 1602
|||||||||||||| | ||| ||||||| |||| |||||||| ||||| || ||||||
Sbjct: 363 gaggaagccaaaatcattgcttgggagagtttgcagaaggcaaaggctgaagctgcaata 304
Query: 1603 cggaaattagagatgaaattagaaaagaagcgagcatcctctatggataagatt 1656
|| ||| | ||||||||||| ||||||||| || | || || ||||||||||||
Sbjct: 303 cgaaaactcgagatgaaattggaaaagaagagatcctcatcaatggataagatt 250
>gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 687
Score = 75.8 bits (38), Expect = 9e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 1543 gaggaagccaaaataactgcatgggagaacctgcaaaaggcaaaagctgaggcagcaata 1602
|||||||||||||| | ||| ||||||| |||| |||||||| ||||| || ||||||
Sbjct: 205 gaggaagccaaaatcattgcttgggagagtttgcagaaggcaaaggctgaagctgcaata 264
Query: 1603 cggaaattagagatgaaattagaaaagaagcgagcatcctctatggataagatt 1656
|| ||| | ||||||||||| ||||||||| || | || || ||||||||||||
Sbjct: 265 cgaaaactcgagatgaaattggaaaagaagagatcctcatccatggataagatt 318
>gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 885
Score = 58.0 bits (29), Expect = 2e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 793 ccttccaaatgggaagatgctgagaggtggatt 825
|||||||||||||| ||||||||||||||||||
Sbjct: 432 ccttccaaatgggatgatgctgagaggtggatt 464
>gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1276
Score = 58.0 bits (29), Expect = 2e-07
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 793 ccttccaaatgggaagatgctgagaggtggatt 825
|||||||||||||| ||||||||||||||||||
Sbjct: 267 ccttccaaatgggatgatgctgagaggtggatt 299