Miyakogusa Predicted Gene

Lj0g3v0111279.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0111279.1 tr|J3RZK1|J3RZK1_CROAD Component of gems 4-like
OS=Crotalus adamanteus PE=2 SV=1,30.86,0.53,seg,NULL,CUFF.6429.1
         (348 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73093 weakly similar to UniRef100_A7NUC3 Cluster: Chr...   670   0.0  
gnl|LJGI|BP085928                                                     224   3e-58

>gnl|LJGI|TC73093 weakly similar to UniRef100_A7NUC3 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (3%)
          Length = 688

 Score =  670 bits (338), Expect = 0.0
 Identities = 345/348 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaactgaaacccaaccctccaatgaaaacaaaaggtccggaggtgataatagaaaac 60
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20  atgcaactgaaacccaaccctccaatgaaaaccaaaggtccggaggtgataatagaaaac 79

                                                                       
Query: 61  aacggaagcagcatcaaagtcctgaggatacttctcacgaagtggataaagagaggacta 120
            |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80  nacggaagcagcatcnaagtcctgaggatacttctcacgaagtggataaagagaggacta 139

                                                                       
Query: 121 aaaaatctcatggtcatagtagcgaccgcaagaaatcaagacgtcatgcatctggtcatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 aaaaatctcatggtcatagtagcgaccgcaagaaatcaagacgtcatgcatctggtcatg 199

                                                                       
Query: 181 aatcagatgaaggccggcacaaaaggcgcaggagagaccaccgcagcgattctcatagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aatcagatgaaggccggcacaaaaggcgcaggagagaccaccgcagcgattctcatagag 259

                                                                       
Query: 241 agggtgattatggagatctcgaagatggggaatttggcgatgtcgcagatagatggtaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agggtgattatggagatctcgaagatggggaatttggcgatgtcgcagatagatggtaat 319

                                                           
Query: 301 catgttattcgttctaatgggacactgtggagaatttgctactagtag 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catgttattcgttctaatgggacactgtggagaatttgctactagtag 367


>gnl|LJGI|BP085928 
          Length = 335

 Score =  224 bits (113), Expect = 3e-58
 Identities = 116/117 (99%)
 Strand = Plus / Minus

                                                                       
Query: 211 ggagagaccaccgcagcgattctcatagagagggtgattatggagatctcgaagatgggg 270
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggagagacccccgcagcgattctcatagagagggtgattatggagatctcgaagatgggg 276

                                                                    
Query: 271 aatttggcgatgtcgcagatagatggtaatcatgttattcgttctaatgggacactg 327
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aatttggcgatgtcgcagatagatggtaatcatgttattcgttctaatgggacactg 219