Miyakogusa Predicted Gene
- Lj0g3v0110939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0110939.1 tr|A9SNT6|A9SNT6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165882,26.67,0.000000000001,ZF_BBOX,Zinc finger, B-box;
B-Box-type zinc finger,Zinc finger, B-box; zf-B_box,Zinc finger,
B-box; ,CUFF.6415.1
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59293 homologue to UniRef100_Q308N9 Cluster: Salt-tol... 1380 0.0
gnl|LJGI|TC77412 homologue to UniRef100_Q308N9 Cluster: Salt-tol... 1047 0.0
gnl|LJGI|TC62336 similar to UniRef100_Q308N9 Cluster: Salt-toler... 281 3e-75
>gnl|LJGI|TC59293 homologue to UniRef100_Q308N9 Cluster: Salt-tolerance protein; n=1;
Glycine max|Rep: Salt-tolerance protein - Glycine max
(Soybean), partial (98%)
Length = 1035
Score = 1380 bits (696), Expect = 0.0
Identities = 710/717 (99%)
Strand = Plus / Plus
Query: 1 atgaaaattcagtgtgatgtgtgtgagaaagctcctgcaactgtgatttgctgtgcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atgaaaattcagtgtgatgtgtgtgagaaagctcctgcaactgtgatttgctgtgcagat 126
Query: 61 gaggcagctttgtgtgctaaatgtgatgttgaggttcatgctgcaaacaagctagcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gaggcagctttgtgtgctaaatgtgatgttgaggttcatgctgcaaacaagctagcaagc 186
Query: 121 aagcaccaaaggcttctccttaattgtctatctaacaagcttcctagatgtgatatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aagcaccaaaggcttctccttaattgtctatctaacaagcttcctagatgtgatatatgc 246
Query: 181 caagataaggcagctttcatattttgtgttgaagacagagctctcttctgtaaggactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 caagataaggcagctttcatattttgtgttgaagacagagctctcttctgtaaggactgt 306
Query: 241 gatgaatcaattcatgtagctggtagcctttctgcaaaccatcagcgcttcctcgctact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gatgaatcaattcatgtagctggtagcctttctgcaaaccatcagcgcttcctcgctact 366
Query: 301 ggtatccgggtggctttgggatctaattgtaccaaaggaaatgnnnnnnntcgcgtggaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 367 ggtatccgggtggctttgggatctaattgtaccaaaggaaatgaaaaaaatcgcgtggaa 426
Query: 361 ccatccgatccgaaagcacaagaagttcctgtgaaaactccttctcagcaagtgcctagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccatccgatccgaaagcacaagaagttcctgtgaaaactccttctcagcaagtgcctagc 486
Query: 421 ttcacatcctcttgggctgttgatgacttattggaattaacagactttgaatcaccagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttcacatcctcttgggctgttgatgacttattggaattaacagactttgaatcaccagac 546
Query: 481 aaaaagcaatcactggagtttggagagcttgaatggctagcagatgcaggtcttttcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aaaaagcaatcactggagtttggagagcttgaatggctagcagatgcaggtcttttcagt 606
Query: 541 gagcagtttcctcatgaaggtttagctgcagctgaagttccacaactttcagtaacacac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gagcagtttcctcatgaaggtttagctgcagctgaagttccacaactttcagtaacacac 666
Query: 601 actagcagtgttgtctcatacaaagcccccaagtccttcatgtctcacaagaagcctagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 actagcagtgttgtctcatacaaagcccccaagtccttcatgtctcacaagaagcctagg 726
Query: 661 attgaagtcatcgatgaagatgatgatgagcacttcactgtgcctgatcttggctga 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 attgaagtcatcgatgaagatgatgatgagcacttcactgtgcctgatcttggctga 783
>gnl|LJGI|TC77412 homologue to UniRef100_Q308N9 Cluster: Salt-tolerance protein; n=1;
Glycine max|Rep: Salt-tolerance protein - Glycine max
(Soybean), partial (78%)
Length = 698
Score = 1047 bits (528), Expect = 0.0
Identities = 548/557 (98%)
Strand = Plus / Plus
Query: 1 atgaaaattcagtgtgatgtgtgtgagaaagctcctgcaactgtgatttgctgtgcagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atgaaaattcagtgtgatgtgtgtgagaaagctcctgcaactgtgatttgctgtgcagat 201
Query: 61 gaggcagctttgtgtgctaaatgtgatgttgaggttcatgctgcaaacaagctagcaagc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaggcagctttgtgtgataaatgtgatgttgaggttcatgctgcaaacaagctagcaagc 261
Query: 121 aagcaccaaaggcttctccttaattgtctatctaacaagcttcctagatgtgatatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagcaccaaaggcttctccttaattgtctatctaacaagcttcctagatgtgatatatgc 321
Query: 181 caagataaggcagctttcatattttgtgttgaagacagagctctcttctgtaaggactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 caagataaggcagctttcatattttgtgttgaagacagagctctcttctgtaaggactgt 381
Query: 241 gatgaatcaattcatgtagctggtagcctttctgcaaaccatcagcgcttcctcgctact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gatgaatcaattcatgtagctggtagcctttctgcaaaccatcagcgcttcctcgctact 441
Query: 301 ggtatccgggtggctttgggatctaattgtaccaaaggaaatgnnnnnnntcgcgtggaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 442 ggtatccgggtggctttgggatctaattgtaccaaaggaaatgaaaaaaatcgcgtggaa 501
Query: 361 ccatccgatccgaaagcacaagaagttcctgtgaaaactccttctcagcaagtgcctagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccatccgatccgaaagcacaagaagttcctgtgaaaactccttctcagcaagtgcctagc 561
Query: 421 ttcacatcctcttgggctgttgatgacttattggaattaacagactttgaatcaccagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttcacatcctcttgggctgttgatgacttattggaattaacagactttgaatcaccagac 621
Query: 481 aaaaagcaatcactggagtttggagagcttgaatggctagcagatgcaggtcttttcagt 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 622 aaaaagcaatcactggagtttggagagcttgaatggctagcagatgcatgtcttttcagt 681
Query: 541 gagcagtttcctcatga 557
|||||||||||||||||
Sbjct: 682 gagcagtttcctcatga 698
>gnl|LJGI|TC62336 similar to UniRef100_Q308N9 Cluster: Salt-tolerance protein; n=1;
Glycine max|Rep: Salt-tolerance protein - Glycine max
(Soybean), partial (82%)
Length = 1024
Score = 281 bits (142), Expect = 3e-75
Identities = 265/306 (86%)
Strand = Plus / Plus
Query: 1 atgaaaattcagtgtgatgtgtgtgagaaagctcctgcaactgtgatttgctgtgcagat 60
||||| ||||| ||||||| |||||||||||||| || ||||||||||| |||||||||
Sbjct: 141 atgaagattcaatgtgatgcatgtgagaaagctccggctactgtgatttgttgtgcagat 200
Query: 61 gaggcagctttgtgtgctaaatgtgatgttgaggttcatgctgcaaacaagctagcaagc 120
|| || |||||||||||| | |||||||||||| |||||||||| |||||||| || |||
Sbjct: 201 gaagctgctttgtgtgctcagtgtgatgttgagattcatgctgccaacaagcttgctagc 260
Query: 121 aagcaccaaaggcttctccttaattgtctatctaacaagcttcctagatgtgatatatgc 180
|||||||| |||||||| ||| | ||||||| ||||||||||| | |||||||||||
Sbjct: 261 aagcaccagaggcttcttcttgaaagtctatcaaacaagcttccaaagtgtgatatatgt 320
Query: 181 caagataaggcagctttcatattttgtgttgaagacagagctctcttctgtaaggactgt 240
|| || ||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||
Sbjct: 321 caggaaaagacagctttcatattttgtgttgaagacagagcactcttctgtcaggattgt 380
Query: 241 gatgaatcaattcatgtagctggtagcctttctgcaaaccatcagcgcttcctcgctact 300
|||||| ||||||||| | |||| ||| | ||||| ||||| ||||||||||| |||||
Sbjct: 381 gatgaaccaattcatgcacctggaagcatctctgcgaaccaccagcgcttccttgctacc 440
Query: 301 ggtatc 306
||||||
Sbjct: 441 ggtatc 446
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 399 tccttctcagcaagtgcctagcttcacatcctcttgggctgttgatgacttattgga 455
|||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 611 tcctcctcagcaagtgcctaacttcacatcctcttgggctgttgatgacttgttgga 667
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 673 gatgaagatgatgatgagcacttcactgtgcctgatcttggctga 717
|||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 907 gatgaagatgatgatgagtacttcactgtgcctaatcttggctga 951