Miyakogusa Predicted Gene
- Lj0g3v0110919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0110919.1 Non Chatacterized Hit- tr|F6YR71|F6YR71_CIOIN
Uncharacterized protein (Fragment) OS=Ciona
intestinal,34.97,0.000000002,FKBP-like,NULL; no description,NULL;
FKBP_C,Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain;
,CUFF.6420.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63891 similar to UniRef100_A7PIS3 Cluster: Peptidyl-p... 900 0.0
gnl|LJGI|BW597754 weakly similar to UniRef100_Q0SNL1 Cluster: Ce... 129 2e-29
gnl|LJGI|DC595967 similar to UniRef100_A2Y5E2 Cluster: Peptidyl-... 101 4e-21
>gnl|LJGI|TC63891 similar to UniRef100_A7PIS3 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), complete
Length = 998
Score = 900 bits (454), Expect = 0.0
Identities = 460/462 (99%)
Strand = Plus / Plus
Query: 1 atgggtgatgcaattgatttgactggggatggaggagttctcaagaccattttgaggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgggtgatgcaattgatttgactggggatggaggagttctcaagaccattttgaggaaa 210
Query: 61 agcaagccggatgctgtggctccatcggatgatcttcctcttgttgatgtacactatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agcaagccggatgctgtggctccatcggatgatcttcctcttgttgatgtacactatgaa 270
Query: 121 ggcacgcttgctgatactggtgaagtatttgacgctacacatgaagataacactttattc 180
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 271 ggcacgcttgctgatactggtgaagtatttgacactacacatgaagataacactatattc 330
Query: 181 tctttcgagcttggaaagggtagtgttattaaggcttgggacgttgcagtgaaaaccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tctttcgagcttggaaagggtagtgttattaaggcttgggacgttgcagtgaaaaccatg 390
Query: 241 aaggttggagaaattgcaaaaataacatgcaagccggaatatgcatatggtagtgcagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aaggttggagaaattgcaaaaataacatgcaagccggaatatgcatatggtagtgcagga 450
Query: 301 tctccaccagatattcccccagatgcaacacttgttttcgaagttgagctacttgcctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tctccaccagatattcccccagatgcaacacttgttttcgaagttgagctacttgcctgt 510
Query: 361 aatccgcgtaagggctccagtctgggaagtgttactgaggagcgggctaggctagaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aatccgcgtaagggctccagtctgggaagtgttactgaggagcgggctaggctagaagag 570
Query: 421 ctgaaaaagcagagagagatagctgctgctgtcaaagaagag 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctgaaaaagcagagagagatagctgctgctgtcaaagaagag 612
>gnl|LJGI|BW597754 weakly similar to UniRef100_Q0SNL1 Cluster: Cell division protein;
n=1; Borrelia afzelii PKo|Rep: Cell division protein -
Borrelia afzelii (strain PKo), partial (5%)
Length = 490
Score = 129 bits (65), Expect = 2e-29
Identities = 254/305 (83%), Gaps = 9/305 (2%)
Strand = Plus / Plus
Query: 158 cacatgaagataacactttattctctttcgagcttggaaagggtag-tgttattaaggct 216
|||||||| ||||| || | ||||||||| |||||||||||||| |||||||||||||
Sbjct: 13 cacatgaaaataactctatgttctctttcttccttggaaagggtagctgttattaaggct 72
Query: 217 tgg-gac-gttgcagtgaaaaccatgaaggttggagaaattgca-aaaataacat-gcaa 272
|| ||| |||||| ||||||||||| | |||||| ||||||| |||||||||| ||
Sbjct: 73 aggcgactgttgcaatgaaaaccatggatgttggaaaaattgctcaaaataacatagcgg 132
Query: 273 gccggaatatgca-tatggtag-tgcaggatctccaccagatattcccccagatgcaaca 330
|| |||||| || |||||||| |||| |||||||||| ||||||||||| ||||| |
Sbjct: 133 ccctgaatatacactatggtagatgcatgatctccacccaatattcccccatatgcagct 192
Query: 331 -cttgttttcgaagttgagctacttgcctgtaatccgcgtaagggctccagtctgggaag 389
||||||||| || || | ||||||||||||||||||| |||||||||| ||||| ||
Sbjct: 193 gcttgttttcaaatttaatctacttgcctgtaatccgcataagggctcccatctggaaac 252
Query: 390 tgttactgaggagcgggcta-ggctagaagagctgaaaaagcagagagagatagctgctg 448
|||||||||||||||||||| |||| |||| || || || || | ||||||| ||||||
Sbjct: 253 tgttactgaggagcgggctatcgctacaagatctcaacaaccacaaagagatatctgctg 312
Query: 449 ctgtc 453
|||||
Sbjct: 313 ctgtc 317
>gnl|LJGI|DC595967 similar to UniRef100_A2Y5E2 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=2; Oryza sativa|Rep: Peptidyl-prolyl
cis-trans isomerase - Oryza sativa subsp. indica (Rice),
partial (11%)
Length = 556
Score = 101 bits (51), Expect = 4e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 109 gtacactatgaaggcacgcttgctgatactggtgaagtatttgacgctacacatg 163
||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 gtacactatgaaggcacgcttgctgatactggtgaagtatttgacactacacatg 556