Miyakogusa Predicted Gene
- Lj0g3v0110849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0110849.1 tr|A2Q365|A2Q365_MEDTR BTB/POZ domain-containing
protein OS=Medicago truncatula GN=MTR_2g048390
PE=4,92.28,0,Broad-Complex, Tramtrack and Bric a brac,BTB/POZ-like;
NPH3,NPH3; BTB,BTB/POZ; no description,BTB/PO,CUFF.6406.1
(816 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV407064 similar to UniRef100_A2Q365 Cluster: BTB/POZ; ... 190 9e-48
gnl|LJGI|BP041933 homologue to UniRef100_A2Q365 Cluster: BTB/POZ... 119 3e-26
gnl|LJGI|TC75649 similar to UniRef100_A7R357 Cluster: Chromosome... 56 4e-07
gnl|LJGI|TC67371 similar to UniRef100_A7R357 Cluster: Chromosome... 56 4e-07
gnl|LJGI|BP042810 similar to UniRef100_A7R357 Cluster: Chromosom... 54 1e-06
>gnl|LJGI|AV407064 similar to UniRef100_A2Q365 Cluster: BTB/POZ; Superoxide dismutase,
copper/zinc binding; NPH3; n=1; Medicago truncatula|Rep:
BTB/POZ; Superoxide dismutase, copper/zinc binding; NPH3
- Medicago truncatula (Barrel medic), partial (18%)
Length = 356
Score = 190 bits (96), Expect = 9e-48
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 721 caggagatcattgctggttctcttgctttctatgctaaaatgtatctaccagggttgaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggagatcattgctggttctcttgctttctatgctaaaatgtatctaccagggttgaat 60
Query: 781 agacgccaggtttctggtgagtccagcacccgtctg 816
||||||||||||||||||||||||||||||||||||
Sbjct: 61 agacgccaggtttctggtgagtccagcacccgtctg 96
>gnl|LJGI|BP041933 homologue to UniRef100_A2Q365 Cluster: BTB/POZ; Superoxide
dismutase, copper/zinc binding; NPH3; n=1; Medicago
truncatula|Rep: BTB/POZ; Superoxide dismutase,
copper/zinc binding; NPH3 - Medicago truncatula (Barrel
medic), partial (3%)
Length = 472
Score = 119 bits (60), Expect = 3e-26
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 1 atggcttgcgtgaaattgggttccaaagctgatgcgttccaccgtcaagggcaggcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atggcttgcgtgaaattgggttccaaagctgatgcgttccaccgtcaagggcaggcctgg 472
>gnl|LJGI|TC75649 similar to UniRef100_A7R357 Cluster: Chromosome undetermined
scaffold_484, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_484,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 836
Score = 56.0 bits (28), Expect = 4e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 47 aagggcaggcctggttctgcacaaccgggctacctagtgatatagttgttgaagttggtg 106
||||||| || |||||||| ||||| || | |||||||| || ||||| ||||| | ||
Sbjct: 544 aagggcaagcatggttctgtacaactggattgcctagtgacatggttgtggaagtggatg 603
Query: 107 agatgtccttccatcttcacaagtttcc 134
| ||| |||||||||| |||||||||||
Sbjct: 604 acatgaccttccatctccacaagtttcc 631
>gnl|LJGI|TC67371 similar to UniRef100_A7R357 Cluster: Chromosome undetermined
scaffold_484, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_484,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 1270
Score = 56.0 bits (28), Expect = 4e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 79 cctagtgatatagttgttgaagttggtgagatgtccttccatcttcacaagtttcc 134
|||||||| || ||||||||||| | ||| ||| |||||||||| |||||||||||
Sbjct: 505 cctagtgacattgttgttgaagtggatgacatgaccttccatctccacaagtttcc 560
>gnl|LJGI|BP042810 similar to UniRef100_A7R357 Cluster: Chromosome undetermined
scaffold_484, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_484,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 503
Score = 54.0 bits (27), Expect = 1e-06
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 47 aagggcaggcctggttctgcacaaccgggctacctagtgatatagttgttgaagttggtg 106
||||||| || |||||||| ||||| || | |||||||| || ||||||||||| | ||
Sbjct: 327 aagggcaagcatggttctgtacaactggattgcctagtgacattgttgttgaagtggatg 268
Query: 107 agatgtccttccatcttcacaag 129
| ||| |||||||||| ||||||
Sbjct: 267 acatgaccttccatctccacaag 245