Miyakogusa Predicted Gene

Lj0g3v0110109.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0110109.1 Non Chatacterized Hit- tr|I1JDA7|I1JDA7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2789
PE=,70.85,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.6353.1
         (2037 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS336505 similar to UniRef100_A7QRK7 Cluster: Chromosom...  1009   0.0  
gnl|LJGI|GO026244 similar to UniRef100_Q56X76 Cluster: DEAD-box ...   379   e-104

>gnl|LJGI|FS336505 similar to UniRef100_A7QRK7 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (19%)
          Length = 702

 Score = 1009 bits (509), Expect = 0.0
 Identities = 512/513 (99%)
 Strand = Plus / Plus

                                                                       
Query: 155 gtcatgccaagcgcttcccatttctcacgccatcgaaccccatcaccgttttgccacggt 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gtcatgccaagcgcttcccatttctcacgccatcgaaccccatcaccgttttgccacggt 249

                                                                       
Query: 215 tcaggcctctctcttccatcgccgcaccagaagttgcggcggaacctgaccagatgaagc 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcaggcctctctcttccatcgccgcaccagaagttgcggcggaacctgaccagatgaagc 309

                                                                       
Query: 275 actccatgctcctcgagaggctcagaagcaggcacctcaaggacagtgctaaaaccccag 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 actccatgctcctcgagaggctcagaagcaggcacctcaaggacagtgctaaaaccccag 369

                                                                       
Query: 335 aagccaagaatcccccaaagaagggtgctgcgaggaaatctgaggaggaggagaagaaga 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aagccaagaatcccccaaagaagggtgctgcgaggaaatctgaggaggaggagaagaaga 429

                                                                       
Query: 395 aagtggcggttgctgggagttttgaggagttgggaatcggtgatgaggttatgggttctg 454
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 430 aagtggcggttgctgggagttttgaggagttgggaatcggcgatgaggttatgggttctg 489

                                                                       
Query: 455 ttagggaaatgggtattgaagttcccactgagatacagtgtattggtgtccctgctgtgt 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttagggaaatgggtattgaagttcccactgagatacagtgtattggtgtccctgctgtgt 549

                                                                       
Query: 515 tggaagggaagagtgtggttttggggtctcatactggatctggcaagaccctggcttact 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tggaagggaagagtgtggttttggggtctcatactggatctggcaagaccctggcttact 609

                                                                       
Query: 575 tgcttccccttgttcagttgctaagacgggatgaacaattgaatggagtactgatgaagc 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgcttccccttgttcagttgctaagacgggatgaacaattgaatggagtactgatgaagc 669

                                            
Query: 635 ctaaacgtccccgagctgttgtgctatgtccta 667
           |||||||||||||||||||||||||||||||||
Sbjct: 670 ctaaacgtccccgagctgttgtgctatgtccta 702



 Score =  212 bits (107), Expect = 6e-54
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctcctcctgaaaggatcactctatctgagcctaaaacccttaaacagagttaagcgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36  atgctcctcctgaaaggatcactctatctgagcctaaaacccttaaacagagttaagcgc 95

                                                          
Query: 61  tgccacaacacaagagctccttcaatggcgggagctacaggaagaac 107
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  tgccacaacacaagagctccttcaatggcgggagctacaggaagaac 142


>gnl|LJGI|GO026244 similar to UniRef100_Q56X76 Cluster: DEAD-box ATP-dependent RNA
            helicase 39; n=1; Arabidopsis thaliana|Rep: DEAD-box
            ATP-dependent RNA helicase 39 - Arabidopsis thaliana
            (Mouse-ear cress), partial (9%)
          Length = 195

 Score =  379 bits (191), Expect = e-104
 Identities = 194/195 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1446 tcgcacaggtagaactgctcgaatgggcgcaaaagggaaagtaacaagtttggttgctaa 1505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tcgcacaggtagaactgctcgaatgggcgcaaaagggaaagtaacaagtttggttgctaa 60

                                                                        
Query: 1506 aaaggacttgaacttggcagccaaaatagaggaggcaataagaaagaatgagagtttgga 1565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61   aaaggacttgaacttggcagccaaaatagaggaggcaataagaaagaatgagattttgga 120

                                                                        
Query: 1566 gggtatcactaaagaaagtgtacgaaaggacattacgcggacccaaatcactgagctgag 1625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gggtatcactaaagaaagtgtacgaaaggacattacgcggacccaaatcactgagctgag 180

                           
Query: 1626 gggaaagaacaaaaa 1640
            |||||||||||||||
Sbjct: 181  gggaaagaacaaaaa 195