Miyakogusa Predicted Gene

Lj0g3v0109839.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0109839.1 Non Chatacterized Hit- tr|D7MNU4|D7MNU4_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,68.97,2e-17,seg,NULL,CUFF.6323.1
         (195 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69975                                                      379   e-105
gnl|LJGI|TC58827                                                      242   6e-64

>gnl|LJGI|TC69975 
          Length = 741

 Score =  379 bits (191), Expect = e-105
 Identities = 194/195 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgttggttgagatggaaaagaagaagaagaaaatggtgtttgtgatggctcacacg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atgatgttggttgagaaggaaaagaagaagaagaaaatggtgtttgtgatggctcacacg 494

                                                                       
Query: 61  aggaggtggaagaaggaatcagtgttcttcaagaaagcgaggaagcatttcaatgttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aggaggtggaagaaggaatcagtgttcttcaagaaagcgaggaagcatttcaatgttgat 554

                                                                       
Query: 121 gttttgcatgttgacactcctagcaatggttctagagtgggtgttgttgtttaccgtttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gttttgcatgttgacactcctagcaatggttctagagtgggtgttgttgtttaccgtttt 614

                          
Query: 181 gtggggaagggttag 195
           |||||||||||||||
Sbjct: 615 gtggggaagggttag 629


>gnl|LJGI|TC58827 
          Length = 786

 Score =  242 bits (122), Expect = 6e-64
 Identities = 140/146 (95%)
 Strand = Plus / Plus

                                                                       
Query: 23  agaagaagaagaaaatggtgtttgtgatggctcacacgaggaggtggaagaaggaatcag 82
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 641 agaagaagaagaaaatggtgtttgtgatggctcacatgaggaggtggaagaaggagtcag 700

                                                                       
Query: 83  tgttcttcaagaaagcgaggaagcatttcaatgttgatgttttgcatgttgacactccta 142
           |||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||
Sbjct: 701 tgttcttcaagaaagctaggaagcactttaatgttgatgttttgcatgttgacactccta 760

                                     
Query: 143 gcaatggttctagagtgggtgttgtt 168
           |||||||||||||||| |||||||||
Sbjct: 761 gcaatggttctagagttggtgttgtt 786