Miyakogusa Predicted Gene
- Lj0g3v0109709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0109709.1 Non Chatacterized Hit- tr|I1L457|I1L457_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,31.06,2e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; seg,NUL,CUFF.6309.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chr... 94 1e-18
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 72 4e-12
gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Ch... 66 2e-10
>gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 898
Score = 93.7 bits (47), Expect = 1e-18
Identities = 197/247 (79%)
Strand = Plus / Plus
Query: 161 tttccctttctcgacaaatggaattcaaaggaatcacaccaaacatggttacttccacca 220
|||||||||||| |||| |||| |||||||||| |||| | || | ||||| ||||
Sbjct: 141 tttccctttctcaacaattggagctcaaaggaattgcacctgatattgctactttgacca 200
Query: 221 tcttgatcaactgtttttgccatttgggtcgaatcaactttgctttctctgtattaggca 280
|| ||||||| ||||| || || ||||| |||| |||| ||| ||||||||| ||||||
Sbjct: 201 tcctgatcaattgtttctgtcacctgggtagaatgaactatgccttctctgtactaggca 260
Query: 281 acattctcaaaaggggttatcacccaaacaccataaccttcactacactcatcaagggca 340
| |||||||| |||| |||||| || |||||| | |||| |||||||| || |||||
Sbjct: 261 aaattctcaagagggcttatcagcctgacaccacagccttgactacacttatgaagggtc 320
Query: 341 tgtgtcataacggcgagattagtaaagcaatgcactttcatgatgatatgatagctaagg 400
| |||| ||| |||||||| || | ||||| |||||||||||||| ||| ||| ||||
Sbjct: 321 tctgtcttaatggcgagatcaggagcgcaattaactttcatgatgatgtgaaagccaagg 380
Query: 401 ggtttca 407
| |||||
Sbjct: 381 gatttca 387
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 71.9 bits (36), Expect = 4e-12
Identities = 141/176 (80%)
Strand = Plus / Plus
Query: 160 atttccctttctcgacaaatggaattcaaaggaatcacaccaaacatggttacttccacc 219
||||| ||||||| ||||||||| | || ||||| | |||||||| |||||| || |
Sbjct: 198 atttcactttctcaccaaatggaacttaagggaattgcgccaaacattgttactctcagc 257
Query: 220 atcttgatcaactgtttttgccatttgggtcgaatcaactttgctttctctgtattaggc 279
||||||||||| |||| ||| || | |||||||||| || ||| || |||||||| | |
Sbjct: 258 atcttgatcaattgttactgcaatctaggtcgaatcacctctgcattttctgtattggcc 317
Query: 280 aacattctcaaaaggggttatcacccaaacaccataaccttcactacactcatcaa 335
||||||||||| || |||| ||| || | ||||| ||||||||||| || |||||
Sbjct: 318 aacattctcaagagaggttttcagcctgataccatcaccttcactactcttatcaa 373
>gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 785
Score = 65.9 bits (33), Expect = 2e-10
Identities = 93/113 (82%)
Strand = Plus / Plus
Query: 220 atcttgatcaactgtttttgccatttgggtcgaatcaactttgctttctctgtattaggc 279
||||||||||| ||||| ||| | |||||| |||| || || ||||||||||| |||
Sbjct: 353 atcttgatcaattgtttctgcaacatgggtcaaatccctttcgccttctctgtattgggc 412
Query: 280 aacattctcaaaaggggttatcacccaaacaccataaccttcactacactcat 332
|| |||||||| ||||||||||| ||| | || ||||||| |||||||||||
Sbjct: 413 aagattctcaagaggggttatcagccagatactgtaaccttgactacactcat 465