Miyakogusa Predicted Gene
- Lj0g3v0109649.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0109649.1 Non Chatacterized Hit- tr|I1LGQ9|I1LGQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54148
PE,51.82,0,seg,NULL,CUFF.6381.1
(5526 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65431 similar to UniRef100_A0M770 Cluster: Membrane p... 1227 0.0
gnl|LJGI|BP063970 similar to UniRef100_A7QM85 Cluster: Chromosom... 242 2e-62
gnl|LJGI|TC72245 weakly similar to UniRef100_A7R3M7 Cluster: Chr... 117 8e-25
gnl|LJGI|TC76773 similar to UniRef100_A7R3M7 Cluster: Chromosome... 58 6e-07
>gnl|LJGI|TC65431 similar to UniRef100_A0M770 Cluster: Membrane protein; n=1; Gramella
forsetii KT0803|Rep: Membrane protein - Gramella forsetii
(strain KT0803), partial (6%)
Length = 645
Score = 1227 bits (619), Expect = 0.0
Identities = 638/645 (98%), Gaps = 1/645 (0%)
Strand = Plus / Plus
Query: 1711 attttgggtgaggcgacacaagtatgtgaaaacaacaaacctgatgagcagggtgaccat 1770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attttgggtgaggcgacacaagtatgtgaaaacaacaaacctgatgagcagggtgaccat 61
Query: 1771 nnnnnnntttgtgaagatgattctgtcagtgaactagagagtataaaggccccttctgat 1830
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaaaa-tttgtgaagatgattctgtcagtgaactagagagtataaaggccccttctgat 120
Query: 1831 tatagcctacttcattgtactgttgaccaatcccatattgttgatgggcgagttggttca 1890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatagcctacttcattgtactgttgaccaatcccatattgttgatgggcgagttggttca 180
Query: 1891 tcacctcttggtgatagcctggaaactaagttgacaacctccactgtatcagttgatgcc 1950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcacctcttggtgatagcctggaaactaagttgacaacctccactgtatcagttgatgcc 240
Query: 1951 atgcctatcagtagttcagcttcacaatatatactagaaaatattatttcatcttcgaca 2010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgcctatcagtagttcagcttcacaatatatactagaaaatattatttcatcttcgaca 300
Query: 2011 ccctgtgacatagtagatactccacctccttctagtagacttgtgtccacacatgaagtt 2070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccctgtgacatagtagatactccacctccttctagtagacttgtgtccacacatgaagtt 360
Query: 2071 acagttgactatgaaattcagcgtatgaagcttgatgggtctgcttctgttgatgaaaag 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acagttgactatgaaattcagcgtatgaagcttgatgggtctgcttctgttgatgaaaag 420
Query: 2131 gaagactctgaagccaaagtatctgaggaagcaggcaatagttcagcttcacaatttata 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaagactctgaagccaaagtatctgaggaagcaggcaatagttcagcttcacaatttata 480
Query: 2191 ttagaaaatattagttcgacttcgacatcctgtgagatagtagatattcttccacctcca 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttagaaaatattagttcgacttcgacatcctgtgagatagtagatattcttccacctcca 540
Query: 2251 tctagcagaattgtgtccacacatgaagttacagctgactatgaagttcagcgggtgaag 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctagcagaattgtgtccacacatgaagttacagctgactatgaagttcagcgggtgaag 600
Query: 2311 cttgatgggtctgcttctattgatggaaaagaagaatctgaagcc 2355
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttgatgggtctgcttctattgatggaaaagaagaatctgaagcc 645
Score = 204 bits (103), Expect = 4e-51
Identities = 180/205 (87%), Gaps = 3/205 (1%)
Strand = Plus / Plus
Query: 2169 tagttcagcttcacaatttatattagaaaatattagttcgacttcgacatcctgtgagat 2228
||||||||||||||||| |||| |||||||||||| ||| |||||||| ||||||| ||
Sbjct: 252 tagttcagcttcacaatatatactagaaaatattatttcatcttcgacaccctgtgacat 311
Query: 2229 agtagatattcttccacctccatctagcagaattgtgtccacacatgaagttacagctga 2288
|||||||| || ||||||| ||||| ||| |||||||||||||||||||||||| |||
Sbjct: 312 agtagatactc---cacctccttctagtagacttgtgtccacacatgaagttacagttga 368
Query: 2289 ctatgaagttcagcgggtgaagcttgatgggtctgcttctattgatggaaaagaagaatc 2348
||||||| ||||||| ||||||||||||||||||||||| |||||| ||| ||||| ||
Sbjct: 369 ctatgaaattcagcgtatgaagcttgatgggtctgcttctgttgatgaaaaggaagactc 428
Query: 2349 tgaagccaaaatagccgaggaagca 2373
|||||||||| || | |||||||||
Sbjct: 429 tgaagccaaagtatctgaggaagca 453
>gnl|LJGI|BP063970 similar to UniRef100_A7QM85 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 397
Score = 242 bits (122), Expect = 2e-62
Identities = 217/246 (88%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 4 gattatgatgacaatgattttcaaagccagaacctccatttagctggtgaagggaacacg 63
|||||||||||||||||||||||| ||||||| |||||||||||||||||||| | | |
Sbjct: 117 gattatgatgacaatgattttcaaggccagaatctccatttagctggtgaaggtagcgcc 176
Query: 64 aaatttcctccagtattaaggccatatgctctccccaagtttga-ttttgacgaaagcct 122
||||||||||||||||||||||| ||||||||| |||||||||| |||||| |||| |||
Sbjct: 177 aaatttcctccagtattaaggccgtatgctctctccaagtttgatttttgatgaaaacct 236
Query: 123 tcaagggc-atttaagatttgatagtttggttgaaactgaagttttcgttggcattgaaa 181
||||| | || |||||||||||||||| ||||||| |||| || |||| |||||||
Sbjct: 237 tcaagcacaatgtaagatttgatagttttgttgaaagtgaaacatttcttggtattgaaa 296
Query: 182 gtaacgaggataaccagtggattgacgcatactcccgggggcgtagtggcatagagttca 241
||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 297 gtaacgaagatcaccagtggattgacgcatactcccgaggtggtagtggcatagagttca 356
Query: 242 gttcaa 247
|||||
Sbjct: 357 attcaa 362
>gnl|LJGI|TC72245 weakly similar to UniRef100_A7R3M7 Cluster: Chromosome chr2
scaffold_541, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_541, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 866
Score = 117 bits (59), Expect = 8e-25
Identities = 205/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Plus
Query: 3908 caagaggttctgttgtggattattcacaggcaccgacttcattacattcttatcaaactc 3967
||||||||||||||||||||||| ||||| | | || |||| ||| |||||||| |||
Sbjct: 20 caagaggttctgttgtggattatccacagccgcttgctacattgcatccttatcaatctc 79
Query: 3968 cacctgtgagaaactttcttggacataacacatcgtggatgtcccaagctccccttcgtg 4027
|||||||||| ||||||||||||||||||||||| ||| | |||||||| || ||||||
Sbjct: 80 cacctgtgaggaactttcttggacataacacatcttggttatcccaagcctccattcgtg 139
Query: 4028 gaccatggattgtttctcctcctcctgcacttgataaaggttcccatctttcatcatcac 4087
|||| |||||| ||||| ||||||| | | |||||||||| ||||||
Sbjct: 140 gaccttggattagctctccaactcctgcgcccagca------cccatctttctgcatcac 193
Query: 4088 ctgtcacagatacaaataagttcagttcagtcaaaggatcttctgtacctccttcctcta 4147
||||| ||||||| |||||| |||| | ||| ||||||||| | ||||||||||| |
Sbjct: 194 ctgtctttgatacaattaagttaggttctggcaagggatcttctctgcctccttcctcga 253
Query: 4148 gcataaagaatgtt 4161
||||||||||||||
Sbjct: 254 gcataaagaatgtt 267
Score = 117 bits (59), Expect = 8e-25
Identities = 116/135 (85%)
Strand = Plus / Plus
Query: 4495 aatgttgagaagaggattatgtcagaagattctcttacgaaaattatggaggctaggata 4554
|||||||||||||||||| | ||||| || ||||||| |||| | | |||||||| | ||
Sbjct: 580 aatgttgagaagaggattctatcagatgagtctcttatgaaagtgaaggaggctaaggta 639
Query: 4555 agcgctgaggaagcttcttctctttctgctgctgctgtgaatcatagcctggagatatgg 4614
|| || ||||||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 640 tatgcagaagaagcttctgctctttctgctgctgctgtgaatcatagcctagagctatgg 699
Query: 4615 aaacagttggataag 4629
|| ||||||||||||
Sbjct: 700 aatcagttggataag 714
Score = 71.9 bits (36), Expect = 4e-11
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 4734 caatgtggcatcaaatgctgcattgcaagcgaaactgatggctgatga 4781
|||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 819 caatgttgcatcaaatgctgcatttcaagcaaaactgatggctgatga 866
>gnl|LJGI|TC76773 similar to UniRef100_A7R3M7 Cluster: Chromosome chr2 scaffold_541,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_541, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1226
Score = 58.0 bits (29), Expect = 6e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 5459 atggatctgaaaatctggaggacaataagataaaggagggctcacttgttgagtttttca 5518
|||||||||||||||| ||||| || || | ||||||||||| ||||||||| ||||||
Sbjct: 86 atggatctgaaaatcttgaggaaaacaacttcaaggagggctctcttgttgaggttttca 145
Query: 5519 a 5519
|
Sbjct: 146 a 146