Miyakogusa Predicted Gene

Lj0g3v0109299.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0109299.1 tr|B9MW42|B9MW42_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_918921 PE=4
SV=1,57.3,2e-16,seg,NULL,TC76323.path1.1
         (292 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76323 similar to UniRef100_A7QLT5 Cluster: Chromosome...   563   e-160

>gnl|LJGI|TC76323 similar to UniRef100_A7QLT5 Cluster: Chromosome chr18 scaffold_121,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_121, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 558

 Score =  563 bits (284), Expect = e-160
 Identities = 290/292 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgatgtctttgtccgagaggatcacgaacttcaccaggaccattatgcttcccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgtctgatgtctttgtccgagaggatcacgaacttcaccaggaccattatgcttcccca 226

                                                                       
Query: 61  ggttctcattcatcaagttttccttcatttgacaccctgaaggaagatttcaacacttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggttctcattcatcaagttttccttcatttgacaccctgaaggaagatttcaacacttct 286

                                                                       
Query: 121 ttacctggtgatcatgtattgggtgacgattcctctaatcaccagcctaagagattaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttacctggtgatcatgtattgggtgacgattcctctaatcaccagcctaagagattaccc 346

                                                                       
Query: 181 tcaatggatgatgacccatatttctcataccccaacttattttcctcccaaaactcaaat 240
           || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 347 tccatggatgatgacccatatttctcataccccaacttattttcctccccaaactcaaat 406

                                                               
Query: 241 gttggatctcaggatcatgcagataatagccgttccactcatgatctatgat 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gttggatctcaggatcatgcagataatagccgttccactcatgatctatgat 458