Miyakogusa Predicted Gene
- Lj0g3v0109289.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0109289.1 Non Chatacterized Hit- tr|I1MNZ8|I1MNZ8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34504
PE,93.15,0,seg,NULL; MJK13.15 PROTEIN,NULL; UNCHARACTERIZED
DUF292,NULL; coiled-coil,NULL; Ist1,Domain of unkno,CUFF.6278.1
(660 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77652 similar to UniRef100_A7QLT5 Cluster: Chromosome... 884 0.0
gnl|LJGI|TC81104 similar to UniRef100_Q7XA80 Cluster: At1g34220;... 272 3e-72
gnl|LJGI|BW595171 similar to UniRef100_A7QLT5 Cluster: Chromosom... 133 2e-30
gnl|LJGI|TC71417 similar to UniRef100_A7R1D0 Cluster: Chromosome... 52 4e-06
>gnl|LJGI|TC77652 similar to UniRef100_A7QLT5 Cluster: Chromosome chr18 scaffold_121,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 668
Score = 884 bits (446), Expect = 0.0
Identities = 449/450 (99%)
Strand = Plus / Plus
Query: 1 atgtcgatgctcgattccttcttcagcaagggttttaaagctgccaagtgcaaaactctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgtcgatgctcgattccttcttcagcaagggttttaaagctgccaagtgcaaaactctg 278
Query: 61 ctgaaactgacaatcccgcggataaagttactaagaaacagaagagagattcagttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctgaaactgacaatcccgcggataaagttactaagaaacagaagagagattcagttgaag 338
Query: 121 aatatgcgacgcgatattgccaagctacttgagactggccaagaagcgacagctcgtatt 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 339 aatatgcgacgcgatattgccaagctactggagactggccaagaagcgacagctcgtatt 398
Query: 181 agggtagaacatattattagagaagagaacatgatggctgctcaagagatcattgaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 agggtagaacatattattagagaagagaacatgatggctgctcaagagatcattgaactc 458
Query: 241 ttctgtgaacttgttgctgttcgtcttccaataattgagtctcaaagggaatgtccccta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttctgtgaacttgttgctgttcgtcttccaataattgagtctcaaagggaatgtccccta 518
Query: 301 gacttgaaggaagccatatctagtatatgttttgcagcaccaaggtgtgctgatctgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gacttgaaggaagccatatctagtatatgttttgcagcaccaaggtgtgctgatctgcca 578
Query: 361 gagttgttgcaggttcagttgcaatttgctaccaaatatgggaaggaatttgtatctgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gagttgttgcaggttcagttgcaatttgctaccaaatatgggaaggaatttgtatctgct 638
Query: 421 gctactgagctcaggccggactgtggtgtt 450
||||||||||||||||||||||||||||||
Sbjct: 639 gctactgagctcaggccggactgtggtgtt 668
>gnl|LJGI|TC81104 similar to UniRef100_Q7XA80 Cluster: At1g34220; n=1; Arabidopsis
thaliana|Rep: At1g34220 - Arabidopsis thaliana
(Mouse-ear cress), partial (15%)
Length = 1409
Score = 272 bits (137), Expect = 3e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 50 gcaaaactctgctgaaactgacaatcccgcggataaagttactaagaaacagaagagaga 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcaaaactctgctgaaactgacaatcccgcggataaagttactaagaaacagaagagaga 497
Query: 110 ttcagttgaagaatatgcgacgcgatattgccaagctacttgagactggccaagaagcga 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttcagttgaagaatatgcgacgcgatattgccaagctacttgagactggccaagaagcga 557
Query: 170 cagctcgtattagggta 186
|||||||||||||||||
Sbjct: 558 cagctcgtattagggta 574
Score = 210 bits (106), Expect = 8e-54
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 183 ggtagaacatattattagagaagagaacatgatggctgctcaagagatcattgaactctt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggtagaacatattattagagaagagaacatgatggctgctcaagagatcattgaactctt 765
Query: 243 ctgtgaacttgttgctgttcgtcttccaataattgagtctcaaagg 288
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 ctgtgaacttgttgctgttcgtcttccaataattgagtctcaaagg 811
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1 atgtcgatgctcgattccttcttcagcaagggttttaaagctgccaagtg 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgtcgatgctcgattccttcttcagcaagggttttaaagctgccaagtg 195
>gnl|LJGI|BW595171 similar to UniRef100_A7QLT5 Cluster: Chromosome chr18 scaffold_121,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_121, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 487
Score = 133 bits (67), Expect = 2e-30
Identities = 67/67 (100%)
Strand = Plus / Plus
Query: 594 cttattgaatggccccacccaattttttagcaggtcaaaattgccgcttcctgatgaaaa 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cttattgaatggccccacccaattttttagcaggtcaaaattgccgcttcctgatgaaaa 63
Query: 654 acacaat 660
|||||||
Sbjct: 64 acacaat 70
>gnl|LJGI|TC71417 similar to UniRef100_A7R1D0 Cluster: Chromosome undetermined
scaffold_345, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_345,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (48%)
Length = 830
Score = 52.0 bits (26), Expect = 4e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 394 aaatatgggaaggaatttgtatctgctgctactgagctcaggccggactgtggtgttaat 453
||||||||||| || ||||||||||| || ||||| || || || |||||||||| |||
Sbjct: 522 aaatatgggaaagattttgtatctgcagcaactgatcttagacctaactgtggtgtaaat 581
Query: 454 cgccag 459
||||||
Sbjct: 582 cgccag 587