Miyakogusa Predicted Gene
- Lj0g3v0109039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0109039.1 Non Chatacterized Hit- tr|D8SB58|D8SB58_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.32,1e-18,ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zinc finger,Zinc
finger,,NODE_32921_length_992_cov_152.976822.path2.1
(859 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59927 similar to UniRef100_A7NU01 Cluster: Chromosome... 1017 0.0
gnl|LJGI|FS356142 similar to UniRef100_A7NU01 Cluster: Chromosom... 686 0.0
gnl|LJGI|AV773558 similar to UniRef100_Q8MP30 Cluster: Uncharact... 80 3e-14
>gnl|LJGI|TC59927 similar to UniRef100_A7NU01 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 746
Score = 1017 bits (513), Expect = 0.0
Identities = 530/538 (98%)
Strand = Plus / Plus
Query: 1 atggtgagagacaacaagacaggctcctacgccgctaaacagaacaaggtcgtcgtcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atggtgagagacaacaagacaggctcctacgccgctaaacagaacaaggtcgtcgtcctc 268
Query: 61 tgggacctcgacaacaaannnnnnngcggcccaccgtaccacgccgccgtctccctcaaa 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 269 tgggacctcgacaacaaacccccccgcggcccaccgtaccacgccgccgtctccctcaaa 328
Query: 121 accctagccgaatccttcggcgacgtcgtcgacatctccgcctacgccaaccgccacgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 accctagccgaatccttcggcgacgtcgtcgacatctccgcctacgccaaccgccacgcc 388
Query: 181 ttcatccacctccctcagtgggtcctccacgagcgccgccaacgcaaaaccaccgacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttcatccacctccctcagtgggtcctccacgagcgccgccaacgcaaaaccaccgacatc 448
Query: 241 ctcgagaaaaagggcatcgtcacgccctctgatccctacgtctgcaccgtctgcggccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctcgagaaaaagggcatcgtcacgccctctgatccctacgtctgcaccgtctgcggccgc 508
Query: 301 aagtgcaagaccaatctcgatctgaagaagcacttcaagcagttacatcagcgcgagcgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagtgcaagaccaatctcgatctgaagaagcacttcaagcagttacatcagcgcgagcgg 568
Query: 361 cagaagaagctgaatcgcatgaactcgctcaaggggaagaagcgacagcggtttaaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cagaagaagctgaatcgcatgaactcgctcaaggggaagaagcgacagcggtttaaggag 628
Query: 421 aggtttattcgtgggaaccataagtataacgaggcggccaggacgcttgtgacgcccaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aggtttattcgtgggaaccataagtataacgaggcggccaggacgcttgtgacgcccaag 688
Query: 481 gttgggtatggtttagcgtcggagctgcggcgtgctggggtttttgtcaagacggtgg 538
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gttgggtatggtttagcctcggagctgcggcgtgctggggtttttgtcaagacggtgg 746
>gnl|LJGI|FS356142 similar to UniRef100_A7NU01 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 713
Score = 686 bits (346), Expect = 0.0
Identities = 349/350 (99%)
Strand = Plus / Minus
Query: 510 gcgtgctggggtttttgtcaagacggtggaggataagcctcaggcggcggattgggcgtt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gcgtgctggggtttttgtcaagacggtggaggataagcctcaggcggcggattgggcgtt 654
Query: 570 gaagaggcagatgcagcattccatgagtagagggattgattggttgtttttggtttcaga 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaagaggcagatgcagcattccatgagtagagggattgattggttgtttttggtttcaga 594
Query: 630 tgattcggatttctccgagatgttgaagcgggccagggaggccaatttggggaccgtggt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgattcggatttctccgagatgttgaagcgggccagggaggccaatttggggaccgtggt 534
Query: 690 ggtcggggatgccgatagggcattggggcagcatgctgatttttgggttccctggattgc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggtcggggatgccgatagggcattggggcagcatgctgatttttgggttccctggattgc 474
Query: 750 ggtcgagaagggcgaggtttcggagatggatttgaagaacagggagaggaggaggagaag 809
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ggtcgagaagggcgaggttttggagatggatttgaagaacagggagaggaggaggagaag 414
Query: 810 aacaacaacagaggattcgccggatggcttgtttttcaatgagggtgatg 859
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aacaacaacagaggattcgccggatggcttgtttttcaatgagggtgatg 364
>gnl|LJGI|AV773558 similar to UniRef100_Q8MP30 Cluster: Uncharacterized histidine-rich
protein JC2V2_0_01666 precursor; n=1; Dictyostelium
discoideum|Rep: Uncharacterized histidine-rich protein
JC2V2_0_01666 precursor - Dictyostelium discoideum
(Slime mold), partial (9%)
Length = 451
Score = 79.8 bits (40), Expect = 3e-14
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 820 gaggattcgccggatggcttgtttttcaatgagggtgatg 859
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggattcgccggatggcttgtttttcaatgagggtgatg 402