Miyakogusa Predicted Gene

Lj0g3v0109029.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0109029.1 Non Chatacterized Hit- tr|D8RX66|D8RX66_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.05,1e-16,seg,NULL; SPRY,SPla/RYanodine receptor
SPRY,gene.g8235.t1.1
         (1245 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60844 similar to UniRef100_A7NU02 Cluster: Chromosome...   216   3e-55

>gnl|LJGI|TC60844 similar to UniRef100_A7NU02 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (49%)
          Length = 2072

 Score =  216 bits (109), Expect = 3e-55
 Identities = 258/308 (83%), Gaps = 6/308 (1%)
 Strand = Plus / Plus

                                                                        
Query: 810  tggctgtggatttgatccaagaatgaagaaggttttcttcacattaggctcagagttagt 869
            ||||||||| |||||||||||   |||||| |||||||||||||||| |||||||||  |
Sbjct: 1227 tggctgtgggtttgatccaaggcagaagaaagttttcttcacattagactcagagttgat 1286

                                                                        
Query: 870  gcatgtgattcactgtcaattagtggaatttggcactccacttttcccaactttggctgc 929
            |||||| || || || || | ||  | ||||||||||||||| |  ||||| ||||||||
Sbjct: 1287 gcatgtaatccattgccagtcagaaggatttggcactccactctatccaacattggctgc 1346

                                                                        
Query: 930  aaacacagacattgaggttttagttaattttggacaaagtgcattcaaatatgcacctgc 989
            ||| | ||||||| ||||  ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1347 aaatatagacattcaggtactagttaattttggacaaagtgcatttaaatatgcacctgc 1406

                                                                        
Query: 990  aaatgcaaacagaacaccaaatccatgcttcatagccccacttgtgtattcttctggtgc 1049
            ||||||  | ||||||||||| ||||| || ||||| ||||||||| ||||        |
Sbjct: 1407 aaatgcgcagagaacaccaaacccatgttttatagcaccacttgtgaattc------gcc 1460

                                                                        
Query: 1050 taccctgggctatgatgacagcaaggagctattctccatgggaaggattgattctcagtg 1109
             |||||| |||| || ||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 1461 aaccctgagctacgacgacagcaaggaactattctctatgggaaggattgattctcaatg 1520

                    
Query: 1110 gcttaatc 1117
            ||||||||
Sbjct: 1521 gcttaatc 1528



 Score = 97.6 bits (49), Expect = 2e-19
 Identities = 64/69 (92%)
 Strand = Plus / Plus

                                                                       
Query: 478 cctggccctccattgggaaactatgcattcccacaagaagcctattttgaaatcaccatc 537
           ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 798 cctggtcctcctttgggaaactatgctttcccacaagaagcctattttgaaatcatcatc 857

                    
Query: 538 ttgaattct 546
           ||| |||||
Sbjct: 858 ttgtattct 866



 Score = 61.9 bits (31), Expect = 9e-09
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 169 ttcagctgggctgatcatccctaccttgctgctgatgctgttgaaaatggatggtctaga 228
           ||||||||||||||  |||| | | | |||| |||||||| |||||||||||||||| ||
Sbjct: 459 ttcagctgggctgagaatccttccatggctgttgatgctggtgaaaatggatggtctcga 518

                      
Query: 229 tttgcattcac 239
           ||||| |||||
Sbjct: 519 tttgctttcac 529