Miyakogusa Predicted Gene
- Lj0g3v0108549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0108549.1 Non Chatacterized Hit- tr|H3JK24|H3JK24_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,28.14,1e-17,HEAT_REPEAT,HEAT, type 2; no
description,Armadillo-like helical; seg,NULL; ARM
repeat,Armadillo-type,CUFF.6242.1
(828 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81379 similar to UniRef100_A7PAV4 Cluster: Chromosome... 466 e-130
>gnl|LJGI|TC81379 similar to UniRef100_A7PAV4 Cluster: Chromosome chr14 scaffold_9,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_9, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (56%)
Length = 2679
Score = 466 bits (235), Expect = e-130
Identities = 504/593 (84%), Gaps = 3/593 (0%)
Strand = Plus / Plus
Query: 1 atgatatttgaaatactatgggaaatggttgttagcactaacgtgaacataaaaataaat 60
||||||||| | |||||||||||||||||||| ||| ||||| ||| ||| ||||| |||
Sbjct: 1460 atgatatttaatatactatgggaaatggttgtcagctctaacatgaccatgaaaattaat 1519
Query: 61 gctgcgaaacttctgaaagctattgtgccgtacattgatgcaaaagttgcttcagctcat 120
|| || |||| ||||||| ||||||| | || ||||||||||| ||||||||| |||||
Sbjct: 1520 gccgctcaactgctgaaagttattgtgtcatatattgatgcaaaggttgcttcaactcat 1579
Query: 121 gctttgcctgccctagttactcttggatctgaccaaaacctcaatgtgaagggtgccagc 180
| ||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||||
Sbjct: 1580 gttttgcctgccctaattactctgggatctgaccaaaacctgaatgtgaagtatgccagc 1639
Query: 181 attgatgcatttggggctgtggctcaacacttcaaaaatgagatgatagttgacaagata 240
|| ||||||||||||||||| |||||||| || ||||| |||||||| ||||||||||||
Sbjct: 1640 atagatgcatttggggctgtagctcaacattttaaaaacgagatgattgttgacaagata 1699
Query: 241 cgtgttcaaatgggtgcttttcttgaagatggatcccatgaaactactattgctgtcatt 300
||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||
Sbjct: 1700 cgtgtgcaaatggatgcttttcttgaagatggttcccatgaagctactattgctgttatt 1759
Query: 301 catgcactggtggttgcaataccacatacaacagagcagcttagagattatcttttgtcc 360
| ||| ||||| ||||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 1760 cgtgcgttggtgattgcagtaccacatacaatagaaagacttagagattatcttttatcc 1819
Query: 361 aagatttctcaacttacagctgtgacaactgctgcttcaagtgacgtgatgcgtcggcaa 420
||||||| || ||||||||| || | | || ||| ||| | |||||||| | |
Sbjct: 1820 aagattttccagcttacagctatgccga---atgtaacaaatgatttaatgcgtcgacga 1876
Query: 421 gaaagagccaatgcattttgtgaggcaatccgagccctggatgctacagatcttcctgca 480
|| ||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 1877 gagagagcagatgctttttgtgaggcaatccgtgctctggatgctacagatcttcctgca 1936
Query: 481 aatagtatacaggacttcctcctgcctgctattcagaatcttttaaaagactcggatgcg 540
|||||| | | |||||| ||||||||||||| ||||| || || |||||| ||||||
Sbjct: 1937 aatagtgtccgcgacttcttcctgcctgctatacagaacctgtttaaagacatggatgca 1996
Query: 541 ctcgatccagcacacagggaagctcttgaaattattatgaaggaaagatcagg 593
| ||||||||||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 1997 ttggatccagcacacaaagaagcccttgaaattattttgaaggaaagatcagg 2049
Score = 91.7 bits (46), Expect = 7e-18
Identities = 126/153 (82%), Gaps = 6/153 (3%)
Strand = Plus / Plus
Query: 658 ggaaagaaagacagcacagaagcaccatcagagagagttgtgtccccaagggctgctaca 717
||||||||||| | ||||||| ||||||||||| ||||| |||||| | ||||| |||
Sbjct: 2141 ggaaagaaagaaaccacagaaccaccatcagaggcagttgcgtcccccaaagctgccaca 2200
Query: 718 tcacaagttccagcagaggacactagattccggcgcatcatgctaggacattttggcgag 777
||| || ||||||||||||||||||||||||||||||| ||| |||| |||||
Sbjct: 2201 ccac------caacagaggacactagattccggcgcatcatgctgggaaatttcggcgac 2254
Query: 778 atacttcggggcaagggaaaatcccaagaggaa 810
|| ||||| ||||||| ||| |||||||||||
Sbjct: 2255 atgcttcgtggcaaggcgaaagcccaagaggaa 2287