Miyakogusa Predicted Gene

Lj0g3v0108539.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0108539.1 Non Chatacterized Hit- tr|I1K1M8|I1K1M8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.49,0,ARM
repeat,Armadillo-type fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Arma,CUFF.6241.1
         (426 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81379 similar to UniRef100_A7PAV4 Cluster: Chromosome...   519   e-147

>gnl|LJGI|TC81379 similar to UniRef100_A7PAV4 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 2679

 Score =  519 bits (262), Expect = e-147
 Identities = 385/426 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtgtgcaattgagcaccacccagatagcacgactcgggattctttgacccacacatta 60
           |||||||| ||||||| ||||||||||||||  ||||| ||||||||||| |||||||| 
Sbjct: 153 atgtgtgctattgagcgccacccagatagcagcactcgagattctttgactcacacattg 212

                                                                       
Query: 61  tttaacttaatcaagcgtcctgatgaacaacagagacggataataatggatgcatgtgtc 120
           ||||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||
Sbjct: 213 tttaatttaatcaagcgtcctgatgagcaacagagacaaataataatggatgcatgtgtc 272

                                                                       
Query: 121 agcctttcaaagaatgttggagaaatgagaacagaaacagaattacttactcaatgttgg 180
           | |||| |||||||||||||||| |||||||||||||||||| | ||| | || || |||
Sbjct: 273 aaccttgcaaagaatgttggagagatgagaacagaaacagaactgcttccacagtgctgg 332

                                                                       
Query: 181 gaacaaataaatcacatgtacgaggagcgtagactgcttgtcgctcagtcatgtggagag 240
           |||||||| | ||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 333 gaacaaatcagtcacatgtacgaggaacgtagactgcttgttgctcaatcatgtggagag 392

                                                                       
Query: 241 cttgcagaatttgtacgacctgagattcgcgattctcttattttatctattgtacagcaa 300
           |||||||||||||| || ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 393 cttgcagaatttgtgcggcctgagattcgtgattctcttattttatctattgttcagcaa 452

                                                                       
Query: 301 ctgatagaagattctgccactattgttcgagaggctgcagctcataatttggctaagctg 360
           ||  |||||||||||||||||||||||||||||||||| |||| |||| |||||| ||||
Sbjct: 453 ctagtagaagattctgccactattgttcgagaggctgccgctcgtaatctggctatgctg 512

                                                                       
Query: 361 cttccgctcttcccaaacatggataaatatttcaaggtcagcttcactatatatgcttcg 420
           ||||| || ||||||||| ||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 513 cttccactattcccaaacgtggataagtatttcaaggtcagcctcactatatttgcttcg 572

                 
Query: 421 aggcaa 426
           ||||||
Sbjct: 573 aggcaa 578