Miyakogusa Predicted Gene

Lj0g3v0108009.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0108009.1 Non Chatacterized Hit- tr|I1MM51|I1MM51_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,27.03,8.4,seg,NULL,CUFF.6187.1
         (198 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW625025 similar to UniRef100_Q8WNY9 Cluster: Sperm pro...   295   5e-80

>gnl|LJGI|BW625025 similar to UniRef100_Q8WNY9 Cluster: Sperm protamine-P1; n=1;
           Chalinolobus beatrix|Rep: Sperm protamine-P1 -
           Chalinolobus beatrix (Beatrix's bat), partial (57%)
          Length = 470

 Score =  295 bits (149), Expect = 5e-80
 Identities = 190/204 (93%), Gaps = 6/204 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactgttatctacaatcaaacctcatactacacaatctctgaagtggaagccatggtg 60
           |||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 101 atgactgttatctacaatcaaaccacctattacacaatctctgaagtggaagccatggtg 160

                                                                       
Query: 61  atctctcatgaagcgcggtttgacaggatgcggaagaagcaactcgcagaaaccactcct 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 161 atctctcatgaagcgcggtttgacaggatgcggaagaagaaactcgcagaaaccactcct 220

                                                                       
Query: 121 tcagtgtttctgacgcaagcgacag------ctccgtcttctacaacatcggcgctgccg 174
           || ||||||||||||||||||||||      || |||||||||||||| |||||| ||||
Sbjct: 221 tcggtgtttctgacgcaagcgacagcgccgtctgcgtcttctacaacaccggcgccgccg 280

                                   
Query: 175 ccacaagctttgtggactcagcct 198
           ||||||||||||||||||||||||
Sbjct: 281 ccacaagctttgtggactcagcct 304