Miyakogusa Predicted Gene
- Lj0g3v0107819.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0107819.2 Non Chatacterized Hit- tr|J3MXH8|J3MXH8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB09G1,27.27,0.00000000002,no description,Zinc finger,
RING/FYVE/PHD-type; ZF_RING_1,Zinc finger, RING-type, conserved site;
OS,CUFF.6173.2
(984 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63284 weakly similar to UniRef100_Q1PEQ5 Cluster: Zin... 1951 0.0
gnl|LJGI|TC80253 66 4e-10
gnl|LJGI|FS320950 similar to UniRef100_Q2JAG2 Cluster: Resolvase... 60 3e-08
>gnl|LJGI|TC63284 weakly similar to UniRef100_Q1PEQ5 Cluster: Zinc finger protein-like
protein; n=1; Arabidopsis thaliana|Rep: Zinc finger
protein-like protein - Arabidopsis thaliana (Mouse-ear
cress), partial (23%)
Length = 1338
Score = 1951 bits (984), Expect = 0.0
Identities = 984/984 (100%)
Strand = Plus / Plus
Query: 1 atgatagtcacttcaaacaccgtaaaccctccaaaacacacaacaccaagacctcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atgatagtcacttcaaacaccgtaaaccctccaaaacacacaacaccaagacctcctcat 94
Query: 61 cttcggagaaaccaaaccgtcgccggcaacaaccgccaccaaattgccctccgcgaacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 cttcggagaaaccaaaccgtcgccggcaacaaccgccaccaaattgccctccgcgaacgt 154
Query: 121 cttcagaagaagaatgcaattgaaatgactggacccgcgaaaaagatgacgaagagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cttcagaagaagaatgcaattgaaatgactggacccgcgaaaaagatgacgaagagaaaa 214
Query: 181 tctcgttccaacgatcgtgatgaaaacaagaagaagaaaacaggcactgtgatagagacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tctcgttccaacgatcgtgatgaaaacaagaagaagaaaacaggcactgtgatagagacg 274
Query: 241 gaagaagaagcttctggcgtcgtcgtgaagccagagaaacagaacggaggcaagaacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaagaagaagcttctggcgtcgtcgtgaagccagagaaacagaacggaggcaagaacaga 334
Query: 301 cacgtgatcaaggcggaagaaaacaacagcaacggcgtcgtaaatttcaacaaccgttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 cacgtgatcaaggcggaagaaaacaacagcaacggcgtcgtaaatttcaacaaccgttgc 394
Query: 361 ttatgcggtatatgcttcgattacaagaaagattctgaaatgttcagagggagcaagtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttatgcggtatatgcttcgattacaagaaagattctgaaatgttcagagggagcaagtgc 454
Query: 421 gaacaccccttttgctctgattgcatttctaagcatgtcgctgctcaaattcagcaaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gaacaccccttttgctctgattgcatttctaagcatgtcgctgctcaaattcagcaaaat 514
Query: 481 aatctcaaggtgaattgtccaaaccctaattgcgacgtcgaattggggccggaacatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatctcaaggtgaattgtccaaaccctaattgcgacgtcgaattggggccggaacatttg 574
Query: 541 aacctgattttgcctaaagaagttgtttttagatgggaatcattgaggtgtgagtctttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aacctgattttgcctaaagaagttgtttttagatgggaatcattgaggtgtgagtctttg 634
Query: 601 attgctgggttgcaaaagagttattgcccctttaagaattgctcagttttgatggtggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 attgctgggttgcaaaagagttattgcccctttaagaattgctcagttttgatggtggat 694
Query: 661 gatgggggtgaaattgtgaccaatgctgagtgcccttcttgccacaggctgttctgtgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gatgggggtgaaattgtgaccaatgctgagtgcccttcttgccacaggctgttctgtgca 754
Query: 721 caatgtatggttccttggcatgcagggatgaattgtgaggaatttcagaagtctggaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 caatgtatggttccttggcatgcagggatgaattgtgaggaatttcagaagtctggaagg 814
Query: 781 gtaaaaggtgaagaagatttagagaagaagtttctgaagttggctaaaagaaaaaagtgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 gtaaaaggtgaagaagatttagagaagaagtttctgaagttggctaaaagaaaaaagtgg 874
Query: 841 cagaggtgtcccaaatgcagcttctatgtccaaagaagaagtggatgtgaacacatgaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 cagaggtgtcccaaatgcagcttctatgtccaaagaagaagtggatgtgaacacatgaaa 934
Query: 901 tgcaggtgtggatgcaacttctgttacgaatgtggcaaggattggaagcatggacatata 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 tgcaggtgtggatgcaacttctgttacgaatgtggcaaggattggaagcatggacatata 994
Query: 961 tgtgataaacataattccacataa 984
||||||||||||||||||||||||
Sbjct: 995 tgtgataaacataattccacataa 1018
>gnl|LJGI|TC80253
Length = 556
Score = 65.9 bits (33), Expect = 4e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 707 ggctgttctgtgcacaatgtatggttccttggcatgcagggatgaattg 755
|||||||| ||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 50 ggctgttcagtgcacattgtatagttccttggcatgcagtgatgaattg 98
Score = 60.0 bits (30), Expect = 3e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 909 tggatgcaacttctgttacgaatgtggcaaggattggaagcatggacatatatgtgataa 968
||||||||||||||| ||| | |||| |||||||| | |||||||||||||||||| ||
Sbjct: 187 tggatgcaacttctgctacaacagtgggaaggattgaaggcatggacatatatgtgacaa 246
Query: 969 ac 970
||
Sbjct: 247 ac 248
>gnl|LJGI|FS320950 similar to UniRef100_Q2JAG2 Cluster: Resolvase-like; n=1; Frankia
sp. CcI3|Rep: Resolvase-like - Frankia sp. (strain
CcI3), partial (6%)
Length = 802
Score = 60.0 bits (30), Expect = 3e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 710 tgttctgtgcacaatgtatggttccttggcatgcagggatgaattg 755
||||| ||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 637 tgttcagtgcacattgtatagttccttggcatgcagcgatgaattg 682