Miyakogusa Predicted Gene

Lj0g3v0107649.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0107649.1 tr|Q9FPI0|Q9FPI0_ARATH 3'-5'-exoribonuclease
family protein OS=Arabidopsis thaliana
GN=AT3g07750/F17,77.78,4e-19,coiled-coil,NULL; seg,NULL,CUFF.6156.1
         (190 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60419 similar to UniRef100_A7P612 Cluster: Chromosome...   313   2e-85
gnl|LJGI|GO028099 similar to UniRef100_A7P612 Cluster: Chromosom...   228   9e-60

>gnl|LJGI|TC60419 similar to UniRef100_A7P612 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (98%)
          Length = 1125

 Score =  313 bits (158), Expect = 2e-85
 Identities = 182/190 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatctctgctgtttccatatctgttaataggcaaggtcacatctgtggtgtcaccaaa 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 748 atgagctctgctgtttccatatctgttaataggcaaggtcacatctgtggtatcaccaaa 807

                                                                       
Query: 61  cgaggaggtgcggggctggatccaagtattgttcttgatatgatatctgtagctaagcat 120
           |||||| |||  ||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 808 cgaggaagtgttgggctggatccaagtatcgttcttgatatgatatctgtggctaagcat 867

                                                                       
Query: 121 gtgagcgagcagttaataaacaaactggattcagaaatagcttctgctgaagctgaagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gtgagcgagcagttaataaacaaactggattcagaaatagcttctgctgaagctgaagat 927

                     
Query: 181 gagtcatgac 190
           || |||||||
Sbjct: 928 gactcatgac 937


>gnl|LJGI|GO028099 similar to UniRef100_A7P612 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 549

 Score =  228 bits (115), Expect = 9e-60
 Identities = 136/143 (95%)
 Strand = Plus / Minus

                                                                       
Query: 48  tggtgtcaccaaacgaggaggtgcggggctggatccaagtattgttcttgatatgatatc 107
           |||| |||||||||||||| |||  ||||||||||||||||| |||||||||||||||||
Sbjct: 402 tggtatcaccaaacgaggaagtgttgggctggatccaagtatcgttcttgatatgatatc 343

                                                                       
Query: 108 tgtagctaagcatgtgagcgagcagttaataaacaaactggattcagaaatagcttctgc 167
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgtggctaagcatgtgagcgagcagttaataaacaaactggattcagaaatagcttctgc 283

                                  
Query: 168 tgaagctgaagatgagtcatgac 190
           ||||||||||||||| |||||||
Sbjct: 282 tgaagctgaagatgactcatgac 260