Miyakogusa Predicted Gene

Lj0g3v0107489.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0107489.1 tr|B7RZW9|B7RZW9_9GAMM PQQ enzyme repeat domain
protein OS=marine gamma proteobacterium HTCC2148 GN=,29.14,5e-18,no
description,Quinonprotein alcohol dehydrogenase-like; beta-propeller
repeat,Pyrrolo-quinoline qui,CUFF.6142.1
         (1254 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75442 similar to UniRef100_A7PMQ3 Cluster: Chromosome...   470   e-131
gnl|LJGI|TC73060 weakly similar to UniRef100_A7PMP9 Cluster: Chr...   264   1e-69

>gnl|LJGI|TC75442 similar to UniRef100_A7PMQ3 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (75%)
          Length = 809

 Score =  470 bits (237), Expect = e-131
 Identities = 319/346 (92%), Gaps = 4/346 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  taaattggacagtgtctagatccactccaactgtagctggggatttactgattattggaa 82
           |||||||||||||||| ||||||||||| ||||| | ||||||||| || || |||||||
Sbjct: 468 taaattggacagtgtcaagatccactcccactgtggttggggatttgctcataattggaa 527

                                                                       
Query: 83  tctatggccctgctgttgttattggtctcaaaagaagaactggtgagcttgtgtggttga 142
           ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||
Sbjct: 528 tctatggccctgctgttgttattggcctcaaaagaaaaactggggagcttgtgtggttga 587

                                                                       
Query: 143 cccatttggataatcatcctaaagccgttatcaccatgtctggaacatactacaacggag 202
           |||||||||||||||    ||  || ||||||||||||||||||||||| ||||| ||||
Sbjct: 588 cccatttggataatc----tactgcagttatcaccatgtctggaacatattacaatggag 643

                                                                       
Query: 203 gttactatgttggaacatcttcactagaagaaggtgcatctattgaacaatgttgcatat 262
           ||||||||||||||  ||||||| |||||||||||||||||||||| ||||| |||||||
Sbjct: 644 gttactatgttggagtatcttcagtagaagaaggtgcatctattgagcaatgctgcatat 703

                                                                       
Query: 263 ttcgtggaagcctcgcaaaacttgatgcccgaaccggtgctatcttatggaagacgttta 322
           |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||
Sbjct: 704 ttcgtggaagcctcgcaaaacttgatgcacgatccggtgctatcttatggaagacgtata 763

                                                         
Query: 323 tgctaccagataacaatggcaagataggagcatatgctggagctgc 368
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgctaccagataacaatggcaagataggagcatatgctggagctgc 809


>gnl|LJGI|TC73060 weakly similar to UniRef100_A7PMP9 Cluster: Chromosome chr14
            scaffold_21, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (15%)
          Length = 501

 Score =  264 bits (133), Expect = 1e-69
 Identities = 163/173 (94%)
 Strand = Plus / Plus

                                                                        
Query: 840  aacatggggtgcagcaactgatgaaaggagggtttacaccaacatagcaaattcagacaa 899
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1    aacatggggtgcagcaactgatgaaaggagggtttacaccaacatagtaaattcagataa 60

                                                                        
Query: 900  gaaaaatttcactcttgtaccatcaaatatgattacaaccactggtgggtgggtagcaat 959
            |||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||
Sbjct: 61   gaaaaatttcactcttgtaccaacaaacatgattacaaccactggtgggtgggtggcaat 120

                                                                 
Query: 960  ggattctagcagtggcaaaattctgtggtctatagctaaccctagtaatagct 1012
            |||| ||||||||||||||||  ||||||||||||||||||| ||||| ||||
Sbjct: 121  ggatcctagcagtggcaaaatcttgtggtctatagctaaccccagtaacagct 173



 Score =  172 bits (87), Expect = 3e-42
 Identities = 144/163 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1043 atagagttggaaccatatatgcaatcaatgctaaaaatggaaattttttatggtcctttg 1102
            |||||||||||| |||||||||||||||||| | |||||||||  |||| ||||||| ||
Sbjct: 228  atagagttggaaacatatatgcaatcaatgccataaatggaaaaattttgtggtcctatg 287

                                                                        
Query: 1103 aaactggaggcagtgttcatggaggcatgtcagttagcaatgggtgcatgtatgcgggtc 1162
            |||||||||| |||||  ||||||||||||||||||||||||||||||| | || |||||
Sbjct: 288  aaactggagggagtgtctatggaggcatgtcagttagcaatgggtgcatatttgtgggtc 347

                                                       
Query: 1163 atggatatagtgtttctctggggtctttctctaacttcacagg 1205
            |||||||||||||| |||| ||| || ||| ||| ||||||||
Sbjct: 348  atggatatagtgttgctctagggcctctctttaaattcacagg 390