Miyakogusa Predicted Gene

Lj0g3v0107329.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0107329.2 Non Chatacterized Hit- tr|D7M148|D7M148_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,44.16,1e-17,seg,NULL; coiled-coil,NULL,CUFF.6126.2
         (648 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS319321 similar to UniRef100_A7P477 Cluster: Chromosom...   476   e-134
gnl|LJGI|BP064840 similar to UniRef100_A7P477 Cluster: Chromosom...   188   3e-47

>gnl|LJGI|FS319321 similar to UniRef100_A7P477 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 809

 Score =  476 bits (240), Expect = e-134
 Identities = 294/312 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagactcagaaagtgaagacgattatgttaatgatgacagagctttagcagtagct 60
           ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 493 atggaagacacagaaagtgaagacgatgatgttaatgatgacagagctttagtagtagct 552

                                                                       
Query: 61  ggcaaacgaatcacttgtgatgaactttatctgagtgacagtgatgattctgatgttatg 120
           ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 553 ggcaagcgaatcacttgtgatgaactttatctaagtgacagtgatgattccgatgttatg 612

                                                                       
Query: 121 tctacttttgaagggcaaccctacctgatggatgaagtggaggaggtagaaggtgccttg 180
           ||| ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 613 tctgcttttgaagtgcaaccctacttgatggatgaagtggaggaggtggaaggtgccttg 672

                                                                       
Query: 181 tttgagttgacccacgaacaccagctaagggttaaggatgaaataaggagtaagatctca 240
           |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 673 tttgagttgacccatgaacaccagcttagggttaaggatgaaataaggagtaagatctca 732

                                                                       
Query: 241 gtgttggagacagctctggtgatggaaagtgaaaactctacttcttcccttctgcgagtg 300
           ||||||||| ||||||||||||  |||||| | ||| |||||||||||||||||||||||
Sbjct: 733 gtgttggagtcagctctggtgaatgaaagtcagaacgctacttcttcccttctgcgagtg 792

                       
Query: 301 gagaaatataaa 312
           ||||||||||||
Sbjct: 793 gagaaatataaa 804


>gnl|LJGI|BP064840 similar to UniRef100_A7P477 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 436

 Score =  188 bits (95), Expect = 3e-47
 Identities = 95/95 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaagactcagaaagtgaagacgattatgttaatgatgacagagctttagcagtagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggaagactcagaaagtgaagacgattatgttaatgatgacagagctttagcagtagct 158

                                              
Query: 61  ggcaaacgaatcacttgtgatgaactttatctgag 95
           |||||||||||||||||||||||||||||||||||
Sbjct: 157 ggcaaacgaatcacttgtgatgaactttatctgag 123



 Score =  161 bits (81), Expect = 7e-39
 Identities = 109/119 (91%), Gaps = 7/119 (5%)
 Strand = Plus / Minus

                                                                       
Query: 138 accctacctgatggatgaagtggaggaggtagaaggtgccttgtttgagttgacccacga 197
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 accctacctgatggatgaagtggaggaggtagaaggtgccttgtttgagttgacccacga 60

                                                                      
Query: 198 acaccagctaagggttaag-------gatgaaataaggagtaagatctcagtgttggag 249
            ||||||||||||||||||       |  ||||||||||||||||||||||||||||||
Sbjct: 59  gcaccagctaagggttaagattaacaggagaaataaggagtaagatctcagtgttggag 1