Miyakogusa Predicted Gene
- Lj0g3v0107099.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0107099.1 Non Chatacterized Hit- tr|I3SKZ0|I3SKZ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.05,0,no
description,NULL; FIBRILLARIN,Fibrillarin, conserved site; RRNA
2-O-METHYLTRANSFERASE FIBRILLARIN,CUFF.6117.1
(801 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76348 similar to UniRef100_Q25C91 Cluster: Tobacco fi... 1211 0.0
gnl|LJGI|TC68051 similar to UniRef100_Q25C91 Cluster: Tobacco fi... 922 0.0
>gnl|LJGI|TC76348 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog;
n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog
- Nicotiana tabacum (Common tobacco), partial (94%)
Length = 1110
Score = 1211 bits (611), Expect = 0.0
Identities = 614/615 (99%)
Strand = Plus / Plus
Query: 187 gttgtggttgagcctcacaggcatgagggtattttcattgccaagggtggtaaagaagat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gttgtggttgagcctcacaggcatgagggtattttcattgccaagggtggtaaagaagat 282
Query: 247 gcccttgttactaagaatctggttccgggtgaagctgtttacaatgagaaaagggttact 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gcccttgttactaagaatctggttccgggtgaagctgtttacaatgagaaaagggttact 342
Query: 307 gtgcagaaagaggacggtacaaaagaggagtatagggtttggaacccttttcgctccaag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtgcagaaagaggacggtacaaaagaggagtatagggtttggaacccttttcgctccaag 402
Query: 367 ttggctgctgccattcttggtggggttgacaacatatggattaaacctggagccaaagtt 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttggctgctgccattcttggtggggttgacaacatatggattaaacctggagccaaagtt 462
Query: 427 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 522
Query: 487 acaggagttgtctatgcagtagaattttctcatagaagcgggcgtgacttggtcaatatg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 acaggagttgtctatgcagtagaattttctcatagaagcgggcgtgacttggtcaatatg 582
Query: 547 gcaaaaaagcgtactaatgttatacccattattgaagatgctagacatccagccaagtac 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gcaaaaaagcgtactaatgttatacccattattgaagatgctagacatccagccaagtac 642
Query: 607 aggatgttggttggaatggtagatgtggtattttctgatgttgctcagcctgatcaggca 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aggatgttggttggaatggtagatgtggtattttctgatgttgctcagcctgatcaggca 702
Query: 667 agaattttagggctgaatgcttcatattttctcaaaactggtggccattttgtcatttca 726
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 703 agaattttagggctgaatgcttcatattttctcaaaactggaggccattttgtcatttca 762
Query: 727 atcaaggcaaactgcatagattcaacagtgcctgcggagactgtttttgttaatgaagtc 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 atcaaggcaaactgcatagattcaacagtgcctgcggagactgtttttgttaatgaagtc 822
Query: 787 aacaagctgaaggta 801
|||||||||||||||
Sbjct: 823 aacaagctgaaggta 837
Score = 75.8 bits (38), Expect = 4e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 atggttcctcctcctcgaggtcgcggtggcagtggtgggttc 42
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 37 atggttcctcctcctcgaggtcgcggtggcagtggttggttc 78
>gnl|LJGI|TC68051 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog;
n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog
- Nicotiana tabacum (Common tobacco), partial (98%)
Length = 1194
Score = 922 bits (465), Expect = 0.0
Identities = 576/613 (93%)
Strand = Plus / Plus
Query: 187 gttgtggttgagcctcacaggcatgagggtattttcattgccaagggtggtaaagaagat 246
||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 284 gttgttgttgagcctcacagacatgagggtattttcattgctaagggtggtaaagaagat 343
Query: 247 gcccttgttactaagaatctggttccgggtgaagctgtttacaatgagaaaagggttact 306
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 344 gctcttgttactaagaatctggttcctggtgaagctgtttacaatgagaaaagggttact 403
Query: 307 gtgcagaaagaggacggtacaaaagaggagtatagggtttggaacccttttcgctccaag 366
|| ||||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||
Sbjct: 404 gttcagaaagaggatggtacaaaagaggaatatagagtttggaatcctttccgctccaag 463
Query: 367 ttggctgctgccattcttggtggggttgacaacatatggattaaacctggagccaaagtt 426
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ttggctgctgccatccttggtggggttgacaacatatggattaaacctggagccaaagtc 523
Query: 427 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctttacctaggagctgcttctggaacaactgtttctcatgtgtctgacattgttggtcca 583
Query: 487 acaggagttgtctatgcagtagaattttctcatagaagcgggcgtgacttggtcaatatg 546
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 584 accggagttgtctatgcagtagagttttctcatagaagtgggcgtgatttggtcaatatg 643
Query: 547 gcaaaaaagcgtactaatgttatacccattattgaagatgctagacatccagccaagtac 606
||||| |||||||| ||||||||||| |||||||| || |||||||||||||| ||||||
Sbjct: 644 gcaaagaagcgtaccaatgttatacctattattgaggacgctagacatccagctaagtac 703
Query: 607 aggatgttggttggaatggtagatgtggtattttctgatgttgctcagcctgatcaggca 666
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 704 aggatgttggttgggatggtagatgtggtattttctgatgttgctcaacctgatcaggca 763
Query: 667 agaattttagggctgaatgcttcatattttctcaaaactggtggccattttgtcatttca 726
|||||| |||| |||||||||||||||||||||||||| || || |||||||||||||||
Sbjct: 764 agaattctaggactgaatgcttcatattttctcaaaacaggaggtcattttgtcatttca 823
Query: 727 atcaaggcaaactgcatagattcaacagtgcctgcggagactgtttttgttaatgaagtc 786
||||||||||||||||||||||| || || ||||| ||||| || ||||||||||||||
Sbjct: 824 atcaaggcaaactgcatagattccactgtccctgctgagacagtctttgttaatgaagtg 883
Query: 787 aacaagctgaagg 799
|||||||||||||
Sbjct: 884 aacaagctgaagg 896