Miyakogusa Predicted Gene
- Lj0g3v0107049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0107049.1 Non Chatacterized Hit- tr|I1MAX0|I1MAX0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.12,0,Ring
finger,Zinc finger, RING-type; RING/U-box,NULL; ZF_RING_2,Zinc finger,
RING-type; RING FINGER P,CUFF.6113.1
(1116 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80726 similar to UniRef100_A7NUT1 Cluster: Chromosome... 973 0.0
gnl|LJGI|AV771099 270 2e-71
>gnl|LJGI|TC80726 similar to UniRef100_A7NUT1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 768
Score = 973 bits (491), Expect = 0.0
Identities = 507/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 1 atgttgatgaaacacagaaaactcttcccagatgaaacagccacaaaccaaacccaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atgttgatgaaacacagaaaactcttcccagatgaaacagccacaaaccaaacccaagat 317
Query: 61 tgttatggcttttgtgatccattatgcccttacaactgctactcaaaccaaaattactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgttatggcttttgtgatccattatgcccttacaactgctactcaaaccaaaattactac 377
Query: 121 ttgcctccaccaccgcctttcggcggcgagaactcaaggcaagagaaccacatcccctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttgcctccaccaccgcctttcggcggcgagaactcaaggcaagagaaccacatcccctcc 437
Query: 181 tacttgatcatccttgtttctttcttcactgtaatttttgttcttgttggattctacgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 438 tacttgatcatccttgtttctttcttcactgtaatttttgttcttgttggattctacata 497
Query: 241 at-caaattgaaatgctatgctgattggtgtggcccgagaagagtgaacaactctgttcc 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atacaaattgaaatgctatgctgattggtgtggcccgagaagagtgaacaactctgttcc 557
Query: 300 ctctcaaaactctgaagagtttctcaatgagaaccaagttgaacacccagtgtggctaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctctcaaaactctgaagagtttctcaatgagaaccaagttgaacacccagtgtggctaat 617
Query: 360 cgccacaattgggttacaacaatcaatcataaactcaatcacagtgtgcaagtacagaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cgccacaattgggttacaacaatcaatcataaactcaatcacagtgtgcaagtacagaaa 677
Query: 420 ggaagagggtttgatcgaaggaaccgagtgttctgtgtgtttaaacgagtttcgtgaaga 479
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ggaagagggtttgatcgaaagaaccgagtgttctgtgtgtttaaacgagtttcgtgaaga 737
Query: 480 cgaaaccttgagactcttaccaaaatgcaac 510
|||||||||||||||||||||||||||||||
Sbjct: 738 cgaaaccttgagactcttaccaaaatgcaac 768
>gnl|LJGI|AV771099
Length = 483
Score = 270 bits (136), Expect = 2e-71
Identities = 164/172 (95%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 946 gatggtgatcactcaaaaacatgtagaacaggagcaggagcaatgcgtcgttcttcaatt 1005
||||||||||||||| ||||||||||||||||| | ||||| |||| |||||||||||||
Sbjct: 483 gatggtgatcactcacaaacatgtagaacaggacccggagccatgcctcgttcttcaatt 424
Query: 1006 gaagagtgtttgcacataagtccggtatcaatgaaaagatcattttcatggaa-cgggag 1064
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 423 gaagagtgtttgcacataagtccggtatccatgaaaagatcattttcatggaaccgggag 364
Query: 1065 gattctatctaggagaggttacatgagtctaaactcaactcttccttattag 1116
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 gattctatctaggagaggttacatgagtctgaactcaactcttccttattag 312