Miyakogusa Predicted Gene

Lj0g3v0106859.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0106859.1 Non Chatacterized Hit- tr|I1N0I4|I1N0I4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.68,2e-18,VACUOLAR
ATP SYNTHASE SUBUNIT H,ATPase, V0 complex, subunit E;
ATP_synt_H,ATPase, V0 complex, subuni,CUFF.6100.1
         (213 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64876 similar to UniRef100_Q8GUB2 Cluster: Vacuolar A...   422   e-118
gnl|LJGI|TC62524 similar to UniRef100_Q8GUB2 Cluster: Vacuolar A...   168   8e-42

>gnl|LJGI|TC64876 similar to UniRef100_Q8GUB2 Cluster: Vacuolar ATPase subunit
           e-like; n=1; Mesembryanthemum crystallinum|Rep: Vacuolar
           ATPase subunit e-like - Mesembryanthemum crystallinum
           (Common ice plant), complete
          Length = 690

 Score =  422 bits (213), Expect = e-118
 Identities = 213/213 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtttcttggtgacgacgctaatcttcgcggtgattggaatcatcgcatgcctctgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 atgggtttcttggtgacgacgctaatcttcgcggtgattggaatcatcgcatgcctctgc 223

                                                                       
Query: 61  accagaatttgctgcaatagaggaccttctaccaatctgtttcatttaactttggttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 accagaatttgctgcaatagaggaccttctaccaatctgtttcatttaactttggttatt 283

                                                                       
Query: 121 actgcaacaatatgctgctggatgatgtgggcgattgtatacctagcacagatgaaaccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 actgcaacaatatgctgctggatgatgtgggcgattgtatacctagcacagatgaaaccg 343

                                            
Query: 181 ctcatagtacctatactgagtgagggcgaatag 213
           |||||||||||||||||||||||||||||||||
Sbjct: 344 ctcatagtacctatactgagtgagggcgaatag 376


>gnl|LJGI|TC62524 similar to UniRef100_Q8GUB2 Cluster: Vacuolar ATPase subunit
           e-like; n=1; Mesembryanthemum crystallinum|Rep: Vacuolar
           ATPase subunit e-like - Mesembryanthemum crystallinum
           (Common ice plant), complete
          Length = 713

 Score =  168 bits (85), Expect = 8e-42
 Identities = 160/185 (86%)
 Strand = Plus / Plus

                                                                       
Query: 19  acgctaatcttcgcggtgattggaatcatcgcatgcctctgcaccagaatttgctgcaat 78
           ||||| |||||||| | |||||||||| |||| |  ||||| |||  |||||||| ||| 
Sbjct: 111 acgcttatcttcgccgcgattggaatcgtcgcgtctctctgtaccgtaatttgcttcaac 170

                                                                       
Query: 79  agaggaccttctaccaatctgtttcatttaactttggttattactgcaacaatatgctgc 138
           |||||| ||||  | ||||| |||||  ||||||||||| ||||||||||||||||||||
Sbjct: 171 agaggatcttcgtctaatctatttcacctaactttggttcttactgcaacaatatgctgc 230

                                                                       
Query: 139 tggatgatgtgggcgattgtatacctagcacagatgaaaccgctcatagtacctatactg 198
           |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||  ||
Sbjct: 231 tggatgatgtgggcaattgtatatctagcacagatgaaaccgctcatagttcctatcttg 290

                
Query: 199 agtga 203
           |||||
Sbjct: 291 agtga 295