Miyakogusa Predicted Gene

Lj0g3v0106569.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0106569.1 Non Chatacterized Hit- tr|D8U2G2|D8U2G2_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,45.83,4e-19,Prefoldin_2,Prefoldin beta-like; coiled-coil,NULL;
seg,NULL; Prefoldin,Prefoldin; SUBFAMILY NOT NAME,CUFF.6099.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60828 similar to UniRef100_Q9AR47 Cluster: VIP3 prote...   759   0.0  

>gnl|LJGI|TC60828 similar to UniRef100_Q9AR47 Cluster: VIP3 protein; n=1; Zea
           mays|Rep: VIP3 protein - Zea mays (Maize), partial (98%)
          Length = 754

 Score =  759 bits (383), Expect = 0.0
 Identities = 386/387 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagcaccagggtggaggatctgaaaccgaagtcacatgggaggatcagcagaacatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atgcagcaccagggtggaggatctgaaaccgaagtcacatgggaggatcagcagaacatc 149

                                                                       
Query: 61  aacaagttcggaaggttgaataatcgccttcacgagcttgacgatgagatcaaagtcgcc 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 150 aacaagttcggaaggttgaataatcgccttcacgagcttgatgatgagatcaaagtcgcc 209

                                                                       
Query: 121 aaggaaacaaatgaaaactttgaggatgcgagcaatgagttgattctcacagatgaagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aaggaaacaaatgaaaactttgaggatgcgagcaatgagttgattctcacagatgaagat 269

                                                                       
Query: 181 gtagttaggtttcaaataggggaggtttttgctcatgtaccaaaggatgaagttgagagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtagttaggtttcaaataggggaggtttttgctcatgtaccaaaggatgaagttgagagc 329

                                                                       
Query: 241 aggatagaacagatgcaagaggtgacaagcaaaaaattggaaaaacttgaagaagaaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aggatagaacagatgcaagaggtgacaagcaaaaaattggaaaaacttgaagaagaaaaa 389

                                                                       
Query: 301 gagtctgtgctagctcagatggctgaactgaagaaagttttgtatgcgaagttcaacgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gagtctgtgctagctcagatggctgaactgaagaaagttttgtatgcgaagttcaacgac 449

                                      
Query: 361 tcaatcaatcttgaggaggaatagcaa 387
           |||||||||||||||||||||||||||
Sbjct: 450 tcaatcaatcttgaggaggaatagcaa 476



 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 315 tcagatggctgaactgaagaaagttttgtatgcgaagttcaacgactcaatcaatcttga 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcagatggctgaactgaagaaagttttgtatgcgaagttcaacgactcaatcaatcttga 569

                        
Query: 375 ggaggaatagcaa 387
           |||||||||||||
Sbjct: 570 ggaggaatagcaa 582