Miyakogusa Predicted Gene
- Lj0g3v0106559.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0106559.1 Non Chatacterized Hit- tr|C5YRD5|C5YRD5_SORBI
Putative uncharacterized protein Sb08g020500
OS=Sorghu,37.25,7e-19,seg,NULL,CUFF.6070.1
(834 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosom... 797 0.0
gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome... 394 e-109
gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chr... 129 3e-29
>gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 635
Score = 797 bits (402), Expect = 0.0
Identities = 402/402 (100%)
Strand = Plus / Minus
Query: 246 cggacataaaaaattattcggcgttgacaaggatgcgaaatgtgtgccttcaggaccagc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cggacataaaaaattattcggcgttgacaaggatgcgaaatgtgtgccttcaggaccagc 576
Query: 306 aaagcgaaaaaggttgcgtcctgctggtcagaaaagagctgcagcatctgatatgtctgc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaagcgaaaaaggttgcgtcctgctggtcagaaaagagctgcagcatctgatatgtctgc 516
Query: 366 ctcagccccaggcatgctaagtgcaacttggggaaagtgtaacagaaaaaacagtcctat 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctcagccccaggcatgctaagtgcaacttggggaaagtgtaacagaaaaaacagtcctat 456
Query: 426 ttggttttcattagttgcttcagaggatcagaaaggagatgcctccttgccacagatctc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttggttttcattagttgcttcagaggatcagaaaggagatgcctccttgccacagatctc 396
Query: 486 atcttgttacttaagaataagagatggtaccgtgcccgtctcatttatacaaaaatacct 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atcttgttacttaagaataagagatggtaccgtgcccgtctcatttatacaaaaatacct 336
Query: 546 tgtgaagaaactcaatcttgccagtgaaacagaggtggaaataatgtgccagggtcagcc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tgtgaagaaactcaatcttgccagtgaaacagaggtggaaataatgtgccagggtcagcc 276
Query: 606 agtgctcccttctctgcaactgcataacgtggtagatctctg 647
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 agtgctcccttctctgcaactgcataacgtggtagatctctg 234
Score = 321 bits (162), Expect = 4e-87
Identities = 178/186 (95%)
Strand = Plus / Minus
Query: 649 gagaatgccagcatctgtggggtcctcagccaaggattttgtaatggttttatcttattg 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gagaatgccagcatctgtggggtcctcagccaaggattttgtaatggttttatcttattg 150
Query: 709 tcgaaaggcctagttccttgttctgtttatacattttgcctcaactctttacatagggat 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tcgaaaggcctagttccttgttctgtttatacattttgcctcaactctttacatagggat 90
Query: 769 tcaacnnnnnnnncttcttctaatagcattcttatattcctgcttgaggatttgtatatt 828
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tcaacttttttttcttcttctaatagcattcttatattcctgcttgaggatttgtatatt 30
Query: 829 taattt 834
||||||
Sbjct: 29 taattt 24
>gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1018
Score = 394 bits (199), Expect = e-109
Identities = 202/203 (99%)
Strand = Plus / Plus
Query: 1 atggagaacagtgtggaacttgcagaagggaaggttgatctctggacaccattgaactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 atggagaacagtgtggaacttgcagaagggaaggttgatctctggacaccattgaactgt 875
Query: 61 cttgttgaagctgcaaacagaacgaagtccttcaaggccaattcacaagctacacctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 876 cttgttgaagctgcaaacagaacgaagtccttcaaggccaattcacaagctacgcctgtt 935
Query: 121 gccgaattagagtgtccaactacttctcatggaggactagatcaacctgaaactacaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gccgaattagagtgtccaactacttctcatggaggactagatcaacctgaaactacaacc 995
Query: 181 aaaacaggcctacctgcttttgc 203
|||||||||||||||||||||||
Sbjct: 996 aaaacaggcctacctgcttttgc 1018
>gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (63%)
Length = 1636
Score = 129 bits (65), Expect = 3e-29
Identities = 143/169 (84%)
Strand = Plus / Plus
Query: 413 aaaacagtcctatttggttttcattagttgcttcagaggatcagaaaggagatgcctcct 472
|||||||| |||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 1118 aaaacagtgctatttggttttcattagttgcttcagaagaccagaaaggagaatttccct 1177
Query: 473 tgccacagatctcatcttgttacttaagaataagagatggtaccgtgcccgtctcattta 532
|||| ||||| ||| | ||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 1178 tgcctcagatttcagcatgttatttaagaataaaggatggtaatgttcccgtctcattta 1237
Query: 533 tacaaaaataccttgtgaagaaactcaatcttgccagtgaaacagaggt 581
| || || || |||| ||||||||| ||||||||||| ||| |||||||
Sbjct: 1238 ttcataagtatcttgcgaagaaacttaatcttgccagcgaagcagaggt 1286
Score = 75.8 bits (38), Expect = 4e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 5 agaacagtgtggaacttgcagaagggaaggttgatctctggacaccattgaactgtcttg 64
|||||||| |||| ||| |||||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 743 agaacagtatggaccttacagaagagaaggttgatctctggacacccttgcactgtcttc 802
Query: 65 ttgaag 70
||||||
Sbjct: 803 ttgaag 808