Miyakogusa Predicted Gene

Lj0g3v0106329.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0106329.1 tr|G7L7C0|G7L7C0_MEDTR Interferon-induced
GTP-binding protein Mx OS=Medicago truncatula
GN=MTR_8g087,78.83,0,GED,GTPase effector domain, GED;
Dynamin_M,Dynamin central domain; Dynamin_N,Dynamin, GTPase
domain;,CUFF.6053.1
         (2056 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO021993 weakly similar to UniRef100_Q9ZP58 Cluster: F8...   884   0.0  

>gnl|LJGI|GO021993 weakly similar to UniRef100_Q9ZP58 Cluster: F8A5.8 protein; n=1;
            Arabidopsis thaliana|Rep: F8A5.8 protein - Arabidopsis
            thaliana (Mouse-ear cress), partial (6%)
          Length = 689

 Score =  884 bits (446), Expect = 0.0
 Identities = 446/446 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1611 ttttttgagggaagtattggatgttaagaagccgtcaaaagtaaagcttgaaggtgttgg 1670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttttttgagggaagtattggatgttaagaagccgtcaaaagtaaagcttgaaggtgttgg 60

                                                                        
Query: 1671 ggtaattgatgttggttatttgagggatcacactaaaattcttagccaagcctttgattt 1730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ggtaattgatgttggttatttgagggatcacactaaaattcttagccaagcctttgattt 120

                                                                        
Query: 1731 gaaagtgagaatgatagcttattggaaaattgtgcagaggaggctgattgactctatggc 1790
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gaaagtgagaatgatagcttattggaaaattgtgcagaggaggctgattgactctatggc 180

                                                                        
Query: 1791 attgcatttaatgttgagtatcaaagaccttgtaaaccatgagcttgaaaaggagatttg 1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  attgcatttaatgttgagtatcaaagaccttgtaaaccatgagcttgaaaaggagatttg 240

                                                                        
Query: 1851 tcatgatttgatgtctccagattgcggttggattgagaggctgttggaggagtctccttc 1910
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tcatgatttgatgtctccagattgcggttggattgagaggctgttggaggagtctccttc 300

                                                                        
Query: 1911 aatttctgggaagagagtgaagcttagcagaagtgttaaagtactccaagaaagcaagga 1970
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aatttctgggaagagagtgaagcttagcagaagtgttaaagtactccaagaaagcaagga 360

                                                                        
Query: 1971 gacagtagctaatatcatggagagaatcagaatggtgacggtaagttgtaatgctccatg 2030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gacagtagctaatatcatggagagaatcagaatggtgacggtaagttgtaatgctccatg 420

                                      
Query: 2031 ttctggaaggcatcccgtcctctgat 2056
            ||||||||||||||||||||||||||
Sbjct: 421  ttctggaaggcatcccgtcctctgat 446