Miyakogusa Predicted Gene
- Lj0g3v0105939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0105939.1 tr|Q8GX43|Q8GX43_ARATH At1g78050 OS=Arabidopsis
thaliana GN=At1g78050/F28K19_30 PE=2 SV=1,78.85,2e-17,Phosphoglycerate
mutase family,Histidine phosphatase superfamily, clade-1; no
description,NULL; His_,CUFF.6046.1
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO033876 571 e-162
gnl|LJGI|TC74489 similar to UniRef100_Q9SGZ6 Cluster: F28K19.26;... 291 3e-78
gnl|LJGI|TC81547 86 3e-16
gnl|LJGI|TC72329 homologue to UniRef100_A7NV13 Cluster: Chromoso... 54 1e-06
>gnl|LJGI|GO033876
Length = 644
Score = 571 bits (288), Expect = e-162
Identities = 318/328 (96%)
Strand = Plus / Plus
Query: 1 atggctactgaagtatatcaccaccctattggaaccttccaataccattcctgcttcaac 60
|||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||
Sbjct: 311 atggctactgaagtatatcaccacgctattggaaccttccaatcccattccagcttcaac 370
Query: 61 aatatcagccatcaccaaaagcttaggaacaatgtattaaagctggaggcaaaggatttt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aatattagccatcaccaaaagcttaggaacaatgtattaaagctggaggcaaaggatttt 430
Query: 121 ttcagcagtaaatgcctgttaaggacaggaactaaaattaatagctctaggcagaggaat 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tttagcagtaaatgcctgttaaggacaggaactaaaattaatagctctaggcagaggaat 490
Query: 181 tgcagtgcaattcgatcttcaacttctcaaacatcaatggttgatacagtgtcatcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgcagtgcaattcgatcttcaacttctcaaacatcaatggttgatacagtgtcatcatcc 550
Query: 241 ccttcaagaagaaatacaagtgacactcccaagaaatcaaggaaagctgcgctgacccct 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
Sbjct: 551 ccttcaagaagaaatacaagtgacactcccaagaaatcaagtgaagctgcgctgatcctt 610
Query: 301 attagacatggcgagtccttgtcgaacg 328
|||||||||||||||||||||| |||||
Sbjct: 611 attagacatggcgagtccttgtggaacg 638
>gnl|LJGI|TC74489 similar to UniRef100_Q9SGZ6 Cluster: F28K19.26; n=3; Arabidopsis
thaliana|Rep: F28K19.26 - Arabidopsis thaliana
(Mouse-ear cress), partial (18%)
Length = 731
Score = 291 bits (147), Expect = 3e-78
Identities = 335/400 (83%)
Strand = Plus / Plus
Query: 190 attcgatcttcaacttctcaaacatcaatggttgatacagtgtcatcatccccttcaaga 249
|||||||||||| |||| || |||||||| |||||| ||||||||||||| ||||||| |
Sbjct: 332 attcgatcttcagcttcccagacatcaattgttgatccagtgtcatcatctccttcaaaa 391
Query: 250 agaaatacaagtgacactcccaagaaatcaaggaaagctgcgctgacccctattagacat 309
|| || | ||||||| ||||||||||||| |||| || ||| || |||| | |||
Sbjct: 392 agcaacagcagtgacaaacccaagaaatcaaatgaagcagctttgatccttattcggcat 451
Query: 310 ggcgagtccttgtcgaacgnnnnnnncttattcacaggttgtgtgaatgttccactaacc 369
|| ||||| || | ||| | || |||||||||||||| |||| ||||||| |
Sbjct: 452 ggtgagtcattatggaatgagaagaatttgttcacaggttgtgttgatgtcccactaagc 511
Query: 370 gagaagggcatagatgaggcaattgaagctggcaaaagaattagcaacattccagttgat 429
||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||
Sbjct: 512 aagaagggtatagatgaggcaattgaagctggtaaaagaattagcagcattcctgttgat 571
Query: 430 gtcatattcacatctgctttaattcgtgcacaaatgacagccatgcttgccatgacacag 489
|||||||| ||||||||| | || || ||||||||||||||||||||||||||||| |||
Sbjct: 572 gtcatatttacatctgctctgatccgcgcacaaatgacagccatgcttgccatgacccag 631
Query: 490 caccgtcgtcggaaggtgcctattataatgcacaatgagagtgaacaagcaagggaatgg 549
||||||||| ||||| ||||| | ||||||||||||||||||||||||| || ||||
Sbjct: 632 caccgtcgtaaaaaggttcctatcgttatgcacaatgagagtgaacaagcaaaggcatgg 691
Query: 550 agtcaagtttttagtgaagatacaaaaaagcaatccattc 589
|||||||||||||||||||| |||| ||| || |||||||
Sbjct: 692 agtcaagtttttagtgaagacacaataaaacagtccattc 731
>gnl|LJGI|TC81547
Length = 582
Score = 85.7 bits (43), Expect = 3e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 427 gatgtcatattcacatctgctttaattcgtgcacaaatgacagccatgcttgccatgaca 486
|||||||| || |||||||| || ||||| ||||| |||||||||||||| || |||||
Sbjct: 374 gatgtcatttttacatctgcgttgattcgagcacagatgacagccatgctcgcgatgact 433
Query: 487 cagcaccgtcgtcggaaggtgcctattataatgcacaatgagagtgaacaagcaa 541
|||||||| || |||||| |||||||| || || |||||||||||||| ||||
Sbjct: 434 cagcaccgccgaaagaaggttcctattattatccataatgagagtgaacaggcaa 488
>gnl|LJGI|TC72329 homologue to UniRef100_A7NV13 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 826
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 583 tccattccagtcataacagcttggcaactaaatga 617
||||||||||||||| || ||||||||||||||||
Sbjct: 15 tccattccagtcatagcatcttggcaactaaatga 49