Miyakogusa Predicted Gene

Lj0g3v0105699.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0105699.2 tr|E4XJD7|E4XJD7_OIKDI Whole genome shotgun
assembly, allelic scaffold set, scaffold scaffoldA_880 O,37.1,0.59,
,CUFF.6027.2
         (204 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60036 similar to UniRef100_A7P349 Cluster: Chromosome...    76   9e-14

>gnl|LJGI|TC60036 similar to UniRef100_A7P349 Cluster: Chromosome chr1 scaffold_5,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_5, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (95%)
          Length = 1211

 Score = 75.8 bits (38), Expect = 9e-14
 Identities = 68/78 (87%)
 Strand = Plus / Plus

                                                                       
Query: 80  atggactcatcacgttgcaacattgttattcttgggacttgggctttggtcctagaaaga 139
           ||||||||||||  || ||||||| |||||||||||  ||||||||||||||| ||||||
Sbjct: 304 atggactcatcatattacaacattcttattcttggggtttgggctttggtccttgaaaga 363

                             
Query: 140 tactatatttgaagaagg 157
             ||||||||||| ||||
Sbjct: 364 ggctatatttgaacaagg 381