Miyakogusa Predicted Gene

Lj0g3v0105629.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0105629.1 Non Chatacterized Hit- tr|I1K5W7|I1K5W7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,71.7,0,HLH,
helix-loop-helix DNA-binding domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; FAMIL,CUFF.6023.1
         (888 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69840 similar to UniRef100_A7PEL5 Cluster: Chromosome...   351   5e-96
gnl|LJGI|DC599544 homologue to UniRef100_A7PEL5 Cluster: Chromos...   119   3e-26

>gnl|LJGI|TC69840 similar to UniRef100_A7PEL5 Cluster: Chromosome chr11 scaffold_13,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_13, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (73%)
          Length = 1566

 Score =  351 bits (177), Expect = 5e-96
 Identities = 322/369 (87%), Gaps = 11/369 (2%)
 Strand = Plus / Plus

                                                                        
Query: 503  cagatccatcttctgagtgcaatagcac--tggagctggtggggcattcaagaaagctag 560
            |||||| ||||||||||||||| |||||  || | ||||||||||| | |||||||||||
Sbjct: 791  cagatctatcttctgagtgcaacagcaccctgcatctggtggggcaatgaagaaagctag 850

                                                                        
Query: 561  ggttcaaccatctacaactcaatctaccttcaaggttaggaaggagaagttaggtgacag 620
            ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 851  ggttcaaccctctacatctcaacctaccttcaaggttaggaaggagaagttaggtgacag 910

                                                                        
Query: 621  aattacagcccttcatcaactcgtttccccatttgggaagactgacacagcctctgtctt 680
            |||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||
Sbjct: 911  aattactgcccttcatcagttagtttccccatttgggaagactgacacagcctctgtctt 970

                                                                        
Query: 681  attagaggctattggttacatcagattccttcagagtcaaattgaggctcttagcttgcc 740
             ||||| |||||||| || ||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 971  gttagaagctattgggtatatcagattccttcagagtcaaattgaggcccttagcttacc 1030

                                                                        
Query: 741  atacttggggagtggatcagggaacatgaggcatcaacaa------tctgttcaaggaga 794
            ||||||| | ||||||||||| | || |||||| ||||||        ||| ||||||| 
Sbjct: 1031 atacttgagcagtggatcaggaagcacgaggcagcaacaacaacagcatgtccaaggag- 1089

                                                                        
Query: 795  tcagaggaattgtatattccctgaagaccctggtcagctgctgaatgaaaactgtttgaa 854
              | | |||| ||||||| ||||||||||| ||||||||||| ||||||||| | |||||
Sbjct: 1090 --aaaagaatagtatatttcctgaagacccaggtcagctgctaaatgaaaacggcttgaa 1147

                     
Query: 855  gaggaaagc 863
            |||||||||
Sbjct: 1148 gaggaaagc 1156



 Score = 93.7 bits (47), Expect = 2e-18
 Identities = 86/99 (86%)
 Strand = Plus / Plus

                                                                       
Query: 164 cttcttcttttccttttcctccttggcatgacaatcaagagcttcctgagtcatggagcc 223
           |||||||| |||| |||||| ||||||  || ||||||||| ||||||||||||||||||
Sbjct: 464 cttcttctcttccctttccttcttggccagaaaatcaagaggttcctgagtcatggagcc 523

                                                  
Query: 224 aattactcatgagtggacttatgtctgaagaagacaagg 262
           |  |||||||||||||| || || |||||||||| ||||
Sbjct: 524 agctactcatgagtggagttgtggctgaagaagataagg 562



 Score = 79.8 bits (40), Expect = 3e-14
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaatagaagtgtcttgcaaagctccccggtgcaacaaatgatggctgggaaccctaac 60
           ||||||||| ||||  | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 295 atgaatagaggtgttcttcaaagctccccagtgcaacaaatgatggctgggaaccctaac 354


>gnl|LJGI|DC599544 homologue to UniRef100_A7PEL5 Cluster: Chromosome chr11
           scaffold_13, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 391

 Score =  119 bits (60), Expect = 3e-26
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                       
Query: 726 ggctcttagcttgccatacttggggagtggatcagggaacatgaggcatcaacaatctgt 785
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggctcttagcttgccatacttggggagtggatcagggaacatgaggcatcaacaatctgt 60



 Score = 95.6 bits (48), Expect = 4e-19
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 784 gttcaaggagatcagaggaattgtatattccctgaagaccctggtcag 831
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gttcaaggagatcagaggaattgtatattccctgaagaccctggtcag 284