Miyakogusa Predicted Gene
- Lj0g3v0105529.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0105529.1 tr|Q4SNY1|Q4SNY1_TETNG Chromosome 15 SCAF14542,
whole genome shotgun sequence OS=Tetraodon nigroviri,32.11,3e-19,no
description,Tetratricopeptide-like helical; no description,NULL;
SUPPRESSOR OF G2 ALLELE OF SKP1 ,CUFF.6014.1
(603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72535 similar to UniRef100_A7QGA6 Cluster: Chromosome... 1172 0.0
gnl|LJGI|TC67064 similar to UniRef100_Q84UV7 Cluster: SGT1; n=1;... 1136 0.0
>gnl|LJGI|TC72535 similar to UniRef100_A7QGA6 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (89%)
Length = 1340
Score = 1172 bits (591), Expect = 0.0
Identities = 600/603 (99%)
Strand = Plus / Plus
Query: 1 atggcttccgatctcgaagccaaagccaaagaggccttcgtggaagaccactttgaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggcttccgatctcgaagccaaagccaaagaggccttcgtggaagaccactttgaacta 140
Query: 61 gcggtggagcttctcactcaggccattgatgtcgaccccaagcatgccgaactctatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gcggtggagcttctcactcaggccattgatgtcgaccccaagcatgccgaactctatgca 200
Query: 121 gaccgtgcccaggcgaacatcaaactcaacaacttcaccgaggctattgctgatgcaaac 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 gaccgtgcccaggcgaacatcaaactcatcaacttcaccgaggctattgctgatgcaaac 260
Query: 181 aaagcaattgagttgaatccttctctatcaaaggcatatttgcgcaaaggtactgcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagcaattgagttgaatccttctctatcaaaggcatatttgcgcaaaggtactgcatgc 320
Query: 241 atgaagcttgaggaataccagactgctaagactgctctggagatgggtgctacattgtct 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaaacttgaggaataccagactgctaagactgctctggagatgggtgctacattgtct 380
Query: 301 acagacaaatcaagatttctaaatttgatcaaagaatgtgataaactcattgcagaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagacaaatcaagatttctaaatttgatcaaagaatgtgataaactcattgcagaagaa 440
Query: 361 tcttatccgatgcctatacaggaaaaggccacaacactggatgcatctccaaaagatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttatccgatgcctatacaggaaaaggccacaacactggatgcatctccaaaagatgtt 500
Query: 421 cagccggataaagatcttacagagcagccaatagtagcagtggctaaacctaaatatagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccggataaagatcttacagagcagccaatagtagcagtggctaaacctaaatatagg 560
Query: 481 catgaattctaccagaaaccggatgaagtggttgtaaccatatttgcaaagggcgtatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgaattctaccagaaaccggatgaagtggttgtaaccatatttgcaaagggcgtatca 620
Query: 541 aaggaaaacattactgttgattttggtgaacaaatattaagtgttagcattaatgtccct 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggaaagcattactgttgattttggtgaacaaatattaagtgttagcattaatgtccct 680
Query: 601 gga 603
|||
Sbjct: 681 gga 683
>gnl|LJGI|TC67064 similar to UniRef100_Q84UV7 Cluster: SGT1; n=1; Nicotiana
benthamiana|Rep: SGT1 - Nicotiana benthamiana, partial
(44%)
Length = 732
Score = 1136 bits (573), Expect = 0.0
Identities = 582/585 (99%)
Strand = Plus / Plus
Query: 1 atggcttccgatctcgaagccaaagccaaagaggccttcgtggaagaccactttgaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggcttccgatctcgaagccaaagccaaagaggccttcgtggaagaccactttgaacta 207
Query: 61 gcggtggagcttctcactcaggccattgatgtcgaccccaagcatgccgaactctatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gcggtggagcttctcactcaggccattgatgtcgaccccaagcatgccgaactctatgca 267
Query: 121 gaccgtgcccaggcgaacatcaaactcaacaacttcaccgaggctattgctgatgcaaac 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 268 gaccgtgcccaggcgaacatcaaactcatcaacttcaccgaggctattgctgatgcaaac 327
Query: 181 aaagcaattgagttgaatccttctctatcaaaggcatatttgcgcaaaggtactgcatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aaagcaattgagttgaatccttctctatcaaaggcatatttgcgcaaaggtactgcatgc 387
Query: 241 atgaagcttgaggaataccagactgctaagactgctctggagatgggtgctacattgtct 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgaaacttgaggaataccagactgctaagactgctctggagatgggtgctacattgtct 447
Query: 301 acagacaaatcaagatttctaaatttgatcaaagaatgtgataaactcattgcagaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acagacaaatcaagatttctaaatttgatcaaagaatgtgataaactcattgcagaagaa 507
Query: 361 tcttatccgatgcctatacaggaaaaggccacaacactggatgcatctccaaaagatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tcttatccgatgcctatacaggaaaaggccacaacactggatgcatctccaaaagatgtt 567
Query: 421 cagccggataaagatcttacagagcagccaatagtagcagtggctaaacctaaatatagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 cagccggataaagatcttacagagcagccaatagtagcagtggctaaacctaaatatagg 627
Query: 481 catgaattctaccagaaaccggatgaagtggttgtaaccatatttgcaaagggcgtatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 catgaattctaccagaaaccggatgaagtggttgtaaccatatttgcaaagggcgtatca 687
Query: 541 aaggaaaacattactgttgattttggtgaacaaatattaagtgtt 585
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaggaaagcattactgttgattttggtgaacaaatattaagtgtt 732