Miyakogusa Predicted Gene
- Lj0g3v0105269.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0105269.1 Non Chatacterized Hit- tr|B6U5R0|B6U5R0_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,77.27,0.00000000000009,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.6018.1
(615 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60075 similar to UniRef100_Q9LHS2 Cluster: Emb|CAB776... 1219 0.0
gnl|LJGI|TC77888 similar to UniRef100_A7QS08 Cluster: Chromosome... 1138 0.0
gnl|LJGI|FS331302 similar to UniRef100_Q9LHS2 Cluster: Emb|CAB77... 159 2e-38
>gnl|LJGI|TC60075 similar to UniRef100_Q9LHS2 Cluster: Emb|CAB77600.1; n=1;
Arabidopsis thaliana|Rep: Emb|CAB77600.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (82%)
Length = 2855
Score = 1219 bits (615), Expect = 0.0
Identities = 615/615 (100%)
Strand = Plus / Plus
Query: 1 atggacgccgtcgcagccgcagtatcaacggcgggaacaaccggctcggtgttgaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atggacgccgtcgcagccgcagtatcaacggcgggaacaaccggctcggtgttgaacaag 164
Query: 61 tccggtagcggcggttccgatcggagtgatgatagagggatatttgagtattttggttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tccggtagcggcggttccgatcggagtgatgatagagggatatttgagtattttggttgg 224
Query: 121 gtgtatcacctgggagtgaattcgcttggtcatgagtactgtcatctccgattcttgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gtgtatcacctgggagtgaattcgcttggtcatgagtactgtcatctccgattcttgttc 284
Query: 181 attagggggaagcatctttctatgtataagcgtgatcctcatgaatacccttcccttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 attagggggaagcatctttctatgtataagcgtgatcctcatgaatacccttcccttaaa 344
Query: 241 ccgattaggcagggagttgtggggcccgcgctaatggtggaggagctaggtcgtcggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ccgattaggcagggagttgtggggcccgcgctaatggtggaggagctaggtcgtcggagg 404
Query: 301 gtcaacaatggggatctttatgttttgcggttttacaatcggttagatgagaccaaaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtcaacaatggggatctttatgttttgcggttttacaatcggttagatgagaccaaaaag 464
Query: 361 ggagaaattgcttgcgctacagctggggaggttcggggatggacagaagcatttgatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggagaaattgcttgcgctacagctggggaggttcggggatggacagaagcatttgatcat 524
Query: 421 gccaagcaacaggttgagtatgagctgtcaagaggaggcagtgccagggacaaactaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gccaagcaacaggttgagtatgagctgtcaagaggaggcagtgccagggacaaactaaac 584
Query: 481 atggaggccgagatcaatcttgaaggacatcggcctagagtgaggcgggtttcccatggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atggaggccgagatcaatcttgaaggacatcggcctagagtgaggcgggtttcccatggt 644
Query: 541 ttgaggaagcatataagaattggccaaggcccagaaatactgttacggcaatcgtcaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttgaggaagcatataagaattggccaaggcccagaaatactgttacggcaatcgtcaaag 704
Query: 601 ttggctagcagggca 615
|||||||||||||||
Sbjct: 705 ttggctagcagggca 719
>gnl|LJGI|TC77888 similar to UniRef100_A7QS08 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 761
Score = 1138 bits (574), Expect = 0.0
Identities = 615/633 (97%), Gaps = 18/633 (2%)
Strand = Plus / Plus
Query: 1 atggacgccgtcgcagccgcagtatcaacggcgggaacaaccggctcggtgttgaacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atggacgccgtcgcagccgcagtatcaacggcgggaacaaccggctcggtgttgaacaag 134
Query: 61 tccggtagcggcggttccgatcggagtgatgatagagggatatttgagtattttggttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tccggtagcggcggttccgatcggagtgatgatagagggatatttgagtattttggttgg 194
Query: 121 gtgtatcacctgggagtgaattcgcttggtcatgagtactgtcatctccgattcttgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gtgtatcacctgggagtgaattcgcttggtcatgagtactgtcatctccgattcttgttc 254
Query: 181 attagggggaagcatctttctatgtataagcgtgatcctcatgaatacccttcccttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 attagggggaagcatctttctatgtataagcgtgatcctcatgaatacccttcccttaaa 314
Query: 241 ccgattaggcagggagttgtggggcccgcgctaatggtggaggagctaggtcgtcggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ccgattaggcagggagttgtggggcccgcgctaatggtggaggagctaggtcgtcggagg 374
Query: 301 gtcaacaatgg------------------ggatctttatgttttgcggttttacaatcgg 342
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 375 gtcaacaatgggttggacaatctctctgaggatctttatgttttgcggttttacaatcgg 434
Query: 343 ttagatgagaccaaaaagggagaaattgcttgcgctacagctggggaggttcggggatgg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttagatgagaccaaaaagggagaaattgcttgcgctacagctggggaggttcggggatgg 494
Query: 403 acagaagcatttgatcatgccaagcaacaggttgagtatgagctgtcaagaggaggcagt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acagaagcatttgatcatgccaagcaacaggttgagtatgagctgtcaagaggaggcagt 554
Query: 463 gccagggacaaactaaacatggaggccgagatcaatcttgaaggacatcggcctagagtg 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gccagggacaaactaaacatggaggccgagatcaatcttgaaggacatcggcctagagtg 614
Query: 523 aggcgggtttcccatggtttgaggaagcatataagaattggccaaggcccagaaatactg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aggcgggtttcccatggtttgaggaagcatataagaattggccaaggcccagaaatactg 674
Query: 583 ttacggcaatcgtcaaagttggctagcagggca 615
|||||||||||||||||||||||||||||||||
Sbjct: 675 ttacggcaatcgtcaaagttggctagcagggca 707
>gnl|LJGI|FS331302 similar to UniRef100_Q9LHS2 Cluster: Emb|CAB77600.1; n=1;
Arabidopsis thaliana|Rep: Emb|CAB77600.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 507
Score = 159 bits (80), Expect = 2e-38
Identities = 179/212 (84%)
Strand = Plus / Plus
Query: 236 ttaaaccgattaggcagggagttgtggggcccgcgctaatggtggaggagctaggtcgtc 295
||||||| ||||||||||||||||| ||||| | || ||||||||||| || || ||||
Sbjct: 292 ttaaacccattaggcagggagttgtagggcctacactgatggtggaggatctcgggcgtc 351
Query: 296 ggagggtcaacaatggggatctttatgttttgcggttttacaatcggttagatgagacca 355
| | ||||||| | |||||| | ||||| | || ||||||||||| ||||||||| ||
Sbjct: 352 gaaaggtcaacgacggggatttctatgtgatacgcttttacaatcgattagatgaggaca 411
Query: 356 aaaagggagaaattgcttgcgctacagctggggaggttcggggatggacagaagcatttg 415
|||||||||||||||||| |||||||||||||| | | ||||||| ||||||||||
Sbjct: 412 gaaagggagaaattgcttgtgctacagctggggaagcccaaggatggatggaagcatttg 471
Query: 416 atcatgccaagcaacaggttgagtatgagctg 447
|||||||||||||||||| | |||||||||||
Sbjct: 472 atcatgccaagcaacagggtcagtatgagctg 503