Miyakogusa Predicted Gene

Lj0g3v0104949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0104949.1 Non Chatacterized Hit- tr|I1M307|I1M307_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11277
PE,73.81,0.0000000003,seg,NULL,12821_g.1
         (241 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74244 weakly similar to UniRef100_A7P215 Cluster: Chr...   149   9e-36
gnl|LJGI|BW626055 similar to UniRef100_Q753K0 Cluster: AFR312Wp;...   141   2e-33

>gnl|LJGI|TC74244 weakly similar to UniRef100_A7P215 Cluster: Chromosome chr19
           scaffold_4, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (71%)
          Length = 1547

 Score =  149 bits (75), Expect = 9e-36
 Identities = 93/99 (93%)
 Strand = Plus / Plus

                                                                       
Query: 143 gtggcaaacaaacaccgccaataaaggcgtggtggcgttcaggttacttccaaatggcaa 202
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 450 gtggcaaacaaacaccgccaataagggcgtggtggcgttcaggttacttccaaatggcaa 509

                                                  
Query: 203 cgtggtgctacttgatgggaacgggaaattcgtttggca 241
           | ||||| |||||||||  |||||||||||||| |||||
Sbjct: 510 catggtgttacttgatgcaaacgggaaattcgtctggca 548



 Score =  139 bits (70), Expect = 9e-33
 Identities = 82/86 (95%)
 Strand = Plus / Plus

                                                                       
Query: 55  accttcttagctcatgcagttgttcctcaaaatgaaaccttcaaatttgaaaactctggt 114
           ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 133 accttcttagctcatgctgttgttcctcaaaacgaaaccttcaaattcgaaaactctggt 192

                                     
Query: 115 gaactaggcccttacattgtggagta 140
           |||||||||||||||||||| |||||
Sbjct: 193 gaactaggcccttacattgttgagta 218


>gnl|LJGI|BW626055 similar to UniRef100_Q753K0 Cluster: AFR312Wp; n=1; Eremothecium
           gossypii|Rep: AFR312Wp - Ashbya gossypii (Yeast)
           (Eremothecium gossypii), partial (8%)
          Length = 225

 Score =  141 bits (71), Expect = 2e-33
 Identities = 109/121 (90%), Gaps = 3/121 (2%)
 Strand = Plus / Plus

                                                                       
Query: 22  ctcctcatcactttactcctcttgt---ctttcctgaccttcttagctcatgcagttgtt 78
           ||||||||||||||| ||||||| |   | ||| | ||||||||||||||||| ||||||
Sbjct: 105 ctcctcatcactttattcctcttcttctcattctttaccttcttagctcatgctgttgtt 164

                                                                       
Query: 79  cctcaaaatgaaaccttcaaatttgaaaactctggtgaactaggcccttacattgtggag 138
           |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 165 cctcaaaacgaaaccttcaaattcgaaaactctggtgaactaggcccttacattgttgag 224

            
Query: 139 t 139
           |
Sbjct: 225 t 225