Miyakogusa Predicted Gene

Lj0g3v0104809.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0104809.1 tr|D5LAY5|D5LAY5_CHLRE 97782m OS=Chlamydomonas
reinhardtii GN=97782m PE=4 SV=1,31.38,4e-19,UNCHARACTERIZED,GINS
complex, subunit Psf3; Sld5,GINS complex,CUFF.5957.1
         (561 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58487 similar to UniRef100_UPI0000162E01 Cluster: TTN...   920   0.0  

>gnl|LJGI|TC58487 similar to UniRef100_UPI0000162E01 Cluster: TTN10 (TITAN 10); n=1;
           Arabidopsis thaliana|Rep: TTN10 (TITAN 10) - Arabidopsis
           thaliana, partial (87%)
          Length = 795

 Score =  920 bits (464), Expect = 0.0
 Identities = 535/561 (95%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaagtactatgatattgatgacattatggtggaggaagagattgtgtcggtgata 60
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 168 atggcaaactactatgatattgatgacattatggtagaggaagagattgtgtcggtggta 227

                                                                       
Query: 61  tttcagaagtcggcatctggagtgggaatagatccaagttctgagacggaccttattgaa 120
           ||||||||| | ||||||||||||||||||||||||||||||||||| |||  |||||||
Sbjct: 228 tttcagaagccagcatctggagtgggaatagatccaagttctgagaccgactctattgaa 287

                                                                       
Query: 121 gcaggctcaaaagttgaattgcctttttggcttgctcatgaattacagttgagacaagca 180
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gcaggttcaaaagtcgaattgcctttttggcttgctcatgaattacagttgagacaagca 347

                                                                       
Query: 181 gtatcagtaaatgttcccccttgtttcaatcaaaaaacaaggctagagatccaagctgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtatcagtaaatgttcccccttgtttcaatcaaaaaacaaggctagagatccaagctgat 407

                                                                       
Query: 241 tctgcatctgtggatctcaagtctagatgtccattcttttatgaatttggttgcaagata 300
           ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 408 tctgcatctgtggatctcaagtccagatgtcaattcttttatgaatttggttgcaagata 467

                                                                       
Query: 301 gcacccatagttggcgaccggaccattgggtttctgttattatctgcatttaagagtagg 360
           ||||| |||||||||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct: 468 gcaccgatagttggcgacagaaccattgggtttctattattatctgcatttaagagtagg 527

                                                                       
Query: 361 tacaaggaagtcctcacgaaggcacatactgcagcatttgcaactggctccaaattttgg 420
           ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 528 tacaaggaagtcctcacaaaggcacatactgcagcatttgcagctggctccaaattttgg 587

                                                                       
Query: 421 actattctgacaaaagaagagatcaatttgtatgaggtagctcaatctgcaatggcatcc 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 588 actattctgacaaaagaagagatcaatttgtatgaggcagctcaatctgcaatggcatcc 647

                                                                       
Query: 481 ttcaagaagtggcgaatnnnnnnncccagatttcagatatctaatgttctgggaagaaag 540
           |||||||||||||||||       ||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttcaagaagtggcgaatgggggggcccagatttcagatatctaatgttctgggaagaaag 707

                                
Query: 541 agaaaatcaactgaatagttg 561
           |||||||||||||||||||||
Sbjct: 708 agaaaatcaactgaatagttg 728