Miyakogusa Predicted Gene
- Lj0g3v0104559.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0104559.1 tr|Q5I6E1|Q5I6E1_VOLCA Arsenite-resistance
protein OS=Volvox carteri f. nagariensis PE=2
SV=1,22.91,3e-17,DUF3546,Protein of unknown function DUF3546;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; coiled-coil,NULL;,CUFF.6127.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70554 similar to UniRef100_A7PG49 Cluster: Chromosome... 827 0.0
gnl|LJGI|TC81837 similar to UniRef100_Q9ZVD0 Cluster: Expressed ... 743 0.0
gnl|LJGI|TC75897 similar to UniRef100_Q9ZVD0 Cluster: Expressed ... 410 e-114
>gnl|LJGI|TC70554 similar to UniRef100_A7PG49 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 499
Score = 827 bits (417), Expect = 0.0
Identities = 417/417 (100%)
Strand = Plus / Plus
Query: 1 atgaatcgtggttattcagatttgccaagtggaggtgcacaaagagaggggttgatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atgaatcgtggttattcagatttgccaagtggaggtgcacaaagagaggggttgatgtcc 142
Query: 61 tataagcaattcattcaggagcttgaagatgatgtactgcctgctgaagctgagcgtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tataagcaattcattcaggagcttgaagatgatgtactgcctgctgaagctgagcgtagg 202
Query: 121 tatcaagagtacaaatcagagtatatttctactcaaaaacgagcttattttaatgctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tatcaagagtacaaatcagagtatatttctactcaaaaacgagcttattttaatgctcat 262
Query: 181 aaggatgaggagtggttgaaagacaagtatcatccaacaaatttacttacagtgattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaggatgaggagtggttgaaagacaagtatcatccaacaaatttacttacagtgattgaa 322
Query: 241 aggaggaatgaaaatgcacgacgagtggcaaaggattttttgcttgatttgcaaagtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggaggaatgaaaatgcacgacgagtggcaaaggattttttgcttgatttgcaaagtgga 382
Query: 301 acattagacctgaatcctgggttaaactcttctccacccaataaatcagggcaggccagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acattagacctgaatcctgggttaaactcttctccacccaataaatcagggcaggccagc 442
Query: 361 gagggaaattcagaggaggaaacagatgctagtggtaaacgaagaagacatggtagg 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagggaaattcagaggaggaaacagatgctagtggtaaacgaagaagacatggtagg 499
>gnl|LJGI|TC81837 similar to UniRef100_Q9ZVD0 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (18%)
Length = 1241
Score = 743 bits (375), Expect = 0.0
Identities = 378/379 (99%)
Strand = Plus / Plus
Query: 1 atgaatcgtggttattcagatttgccaagtggaggtgcacaaagagaggggttgatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 atgaatcgtggttattcagatttgccaagtggaggtgcacaaagagaggggttgatgtcc 681
Query: 61 tataagcaattcattcaggagcttgaagatgatgtactgcctgctgaagctgagcgtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tataagcaattcattcaggagcttgaagatgatgtactgcctgctgaagctgagcgtagg 741
Query: 121 tatcaagagtacaaatcagagtatatttctactcaaaaacgagcttattttaatgctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tatcaagagtacaaatcagagtatatttctactcaaaaacgagcttattttaatgctcat 801
Query: 181 aaggatgaggagtggttgaaagacaagtatcatccaacaaatttacttacagtgattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aaggatgaggagtggttgaaagacaagtatcatccaacaaatttacttacagtgattgaa 861
Query: 241 aggaggaatgaaaatgcacgacgagtggcaaaggattttttgcttgatttgcaaagtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 aggaggaatgaaaatgcacgacgagtggcaaaggattttttgcttgatttgcaaagtgga 921
Query: 301 acattagacctgaatcctgggttaaactcttctccacccaataaatcagggcaggccagc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 acattagacctgaattctgggttaaactcttctccacccaataaatcagggcaggccagc 981
Query: 361 gagggaaattcagaggagg 379
|||||||||||||||||||
Sbjct: 982 gagggaaattcagaggagg 1000
>gnl|LJGI|TC75897 similar to UniRef100_Q9ZVD0 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (27%)
Length = 676
Score = 410 bits (207), Expect = e-114
Identities = 438/515 (85%)
Strand = Plus / Plus
Query: 644 catctgttaagggcttggagggtgttgagctactggacactcttattacatatctttggc 703
|||| |||||||| || ||||||||||| || ||||||| |||||||||||||||||||
Sbjct: 31 catcggttaagggtttagagggtgttgaacttttggacacacttattacatatctttggc 90
Query: 704 ggattcatggtattgattattatggaatggtggagactaatgaggctaaaggttttaggc 763
||||||||||| | ||||||||||| || | ||||||| ||||||||| ||||||||||
Sbjct: 91 ggattcatggtgtagattattatggtttgattgagactattgaggctaagggttttaggc 150
Query: 764 atgtgagaccagatggaaccgggcacgaagaagcaagtaaatcagggccagaatgggaga 823
|||| || ||||| |||||| || |||||| | ||||||||||| | ||||||||||
Sbjct: 151 atgtcaggccagagggaaccacacatgaagaaaaaggtaaatcagggtctgaatgggaga 210
Query: 824 aaaaacttgattcattttggcagggaaggttgaatggtcaggatcccttggatgtaatga 883
| ||||| || |||||||||||||||||| ||||||||||||||||| |||| |||||||
Sbjct: 211 agaaactagactcattttggcagggaaggctgaatggtcaggatcccgtggaagtaatga 270
Query: 884 ctgctaaggaaaagatagatgctgcagcgaccgattttttggatccacatgttagaaaaa 943
|||||||||| ||||||||||||||||| | || ||||||||| || |||| ||||
Sbjct: 271 ctgctaaggagaagatagatgctgcagcagcggaagcgttggatccatatattaggaaaa 330
Query: 944 taagagatgaaaagtatggatggaagtatggttgcggagctaagggctgcacaaaacttt 1003
| || ||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 331 ttagggatgaaaagtatggatggaagtatggttgtggagccaagggctgcacgaagcttt 390
Query: 1004 ttcacgcatctgagtctgtgcataaacatctgaagctaaaacatccagagcttttgatgg 1063
|||| || ||||| | |||||| ||||| |||||||||||||| ||||||||| | |
Sbjct: 391 ttcatgcttctgaatttgtgcacaaacacctgaagctaaaacacccagagcttgctgttg 450
Query: 1064 aactaacggcaaaattgcgggaagatctttattttcaaaattacatgaatgattctaatg 1123
||| ||| ||||| |||| || ||||| |||||||||||||||||||||||| | |||
Sbjct: 451 aacaaaccacaaaagtgcgtgaggatctctattttcaaaattacatgaatgatccagatg 510
Query: 1124 cacctggtggaacgcctatcatgcagcaacctcag 1158
| |||||||||| |||| | ||||||||| |||||
Sbjct: 511 ctcctggtggaaagcctgtaatgcagcaaactcag 545