Miyakogusa Predicted Gene
- Lj0g3v0104499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0104499.1 tr|A9YWR6|A9YWR6_MEDTR ABC transporter
OS=Medicago truncatula GN=STR2 PE=2 SV=1,84.21,0,P-loop containing
nucleoside triphosphate hydrolases,NULL; no description,NULL;
ABC2_membrane,ABC-2 ,gene.g7917.t1.1
(1644 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012322 similar to UniRef100_A9YWR6 Cluster: ABC trans... 1037 0.0
gnl|LJGI|FS344486 homologue to UniRef100_A9YWR6 Cluster: ABC tra... 482 e-135
gnl|LJGI|TC82673 similar to UniRef100_A7PWF9 Cluster: Chromosome... 147 3e-34
>gnl|LJGI|GO012322 similar to UniRef100_A9YWR6 Cluster: ABC transporter; n=1; Medicago
truncatula|Rep: ABC transporter - Medicago truncatula
(Barrel medic), partial (29%)
Length = 646
Score = 1037 bits (523), Expect = 0.0
Identities = 529/531 (99%)
Strand = Plus / Plus
Query: 557 cccctggctactactacgcctactcgagtgaaatcctcccagcaactccaacaccacaca 616
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 cccctggcaactactacgcctactcgagtgaaatcctcccagcaactccaacaccacaca 62
Query: 617 gcagtgactacacagtgaatgagaatgactacctgacacccccaaattcaaaacttgaac 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcagtgactacacagtgaatgagaatgactacctgacacccccaaattcaaaacttgaac 122
Query: 677 atcttggtccaaagtttgcaaattcctacacaagagagatttggatcctgatgcgccgca 736
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atcttggtccagagtttgcaaattcctacacaagagagatttggatcctgatgcgccgca 182
Query: 737 acttcataaacataaggaggacccctgagcttttcctgtcaagactcatggtcctcacct 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acttcataaacataaggaggacccctgagcttttcctgtcaagactcatggtcctcacct 242
Query: 797 tcatgggtttcatgatggccaccatgttccacaaccccaaagagtccttgcaaggaatca 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcatgggtttcatgatggccaccatgttccacaaccccaaagagtccttgcaaggaatca 302
Query: 857 cgaaccgtctcagcttcttcatcttcaccgtgtgcctctttttcttctcttccaatgatg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cgaaccgtctcagcttcttcatcttcaccgtgtgcctctttttcttctcttccaatgatg 362
Query: 917 ccgtcccggccttcatccaagagaggttcatcttcatccgcgagacttcacacaatgcct 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ccgtcccggccttcatccaagagaggttcatcttcatccgcgagacttcacacaatgcct 422
Query: 977 acagagcttcctcctacacctttgcaggcctaatcacccacatgccatttcttgctctcc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acagagcttcctcctacacctttgcaggcctaatcacccacatgccatttcttgctctcc 482
Query: 1037 aagcttcagcttatgcaggcattgtttggtttgctttgcagcttagaggcc 1087
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aagcttcagcttatgcaggcattgtttggtttgctttgcagcttagaggcc 533
Score = 139 bits (70), Expect = 6e-32
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1131 aaccaattcattcgttgtgtttgtgagctcggtcgttccgaactacatcttggggtatgc 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 aaccaattcattcgttgtgtttgtgagctcggtcgttccgaactacatcttggggtatgc 636
Query: 1191 agcggttatc 1200
||||||||||
Sbjct: 637 agcggttatc 646
>gnl|LJGI|FS344486 homologue to UniRef100_A9YWR6 Cluster: ABC transporter; n=1;
Medicago truncatula|Rep: ABC transporter - Medicago
truncatula (Barrel medic), partial (10%)
Length = 737
Score = 482 bits (243), Expect = e-135
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 atgcctcaagccaacggctatcgtgatgagactgtaattgacataaagaaaccggtgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgcctcaagccaacggctatcgtgatgagactgtaattgacataaagaaaccggtgagt 554
Query: 61 ttcaccgggggtgttgagtttgaaagccttacatatactgtgagaaagaagaagaaggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttcaccgggggtgttgagtttgaaagccttacatatactgtgagaaagaagaagaaggtt 614
Query: 121 gatgggaagtggtccagtgaagatgtggacttgctgcatgatatcactggttatgcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gatgggaagtggtccagtgaagatgtggacttgctgcatgatatcactggttatgcacca 674
Query: 181 aaaggttgcgtcactgcagtgatggggcctagtggtgcagggaagtccacttttcttgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaaggttgcgtcactgcagtgatggggcctagtggtgcagggaagtccacttttcttgat 734
Query: 241 gga 243
|||
Sbjct: 735 gga 737
>gnl|LJGI|TC82673 similar to UniRef100_A7PWF9 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 928
Score = 147 bits (74), Expect = 3e-34
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 1496 ttctggtcctcgttgtgaccgtggcggcgctcttcttcctccgcaacgccggcgacaccg 1555
||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 579 ttctgctcctcgctgtgacagtggcggcgctcttcttcctccgcaacgccggcgataccg 638
Query: 1556 ccgcgctcatctgcttccagaaccaggcgc 1585
||||||||||||||||||||||||||||||
Sbjct: 639 ccgcgctcatctgcttccagaaccaggcgc 668
Score = 81.8 bits (41), Expect = 1e-14
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 1446 gtccaagatcgttcttcaattccaaatccaaatcaaaagccccat 1490
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 458 gtccaagatcgttcttcaattccaaatccaaatcaaaagtcccat 502