Miyakogusa Predicted Gene
- Lj0g3v0104259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0104259.1 tr|I3SCY1|I3SCY1_LOTJA DNA primase OS=Lotus
japonicus PE=2 SV=1,98.75,0,DNA_primase_S,DNA primase, small subunit;
DNA PRIMASE SMALL SUBUNIT,DNA primase, small subunit, euka,CUFF.5920.1
(552 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81177 similar to UniRef100_A7QN91 Cluster: DNA primas... 954 0.0
gnl|LJGI|TC75682 similar to UniRef100_A2Y3N8 Cluster: DNA primas... 583 e-166
gnl|LJGI|FS337574 similar to UniRef100_A2Y3N8 Cluster: DNA prima... 396 e-110
>gnl|LJGI|TC81177 similar to UniRef100_A7QN91 Cluster: DNA primase; n=1; Vitis
vinifera|Rep: DNA primase - Vitis vinifera (Grape),
partial (61%)
Length = 1058
Score = 954 bits (481), Expect = 0.0
Identities = 481/481 (100%)
Strand = Plus / Plus
Query: 1 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 247
Query: 61 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 307
Query: 121 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 367
Query: 181 aatgatatttatctgcggttccaatctttcaacaatgcccttgagctcgaaaactccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatgatatttatctgcggttccaatctttcaacaatgcccttgagctcgaaaactccatc 427
Query: 241 aaagaaaagtccccatttaagatagacattggacctgtctacactgtcgatcctgcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aaagaaaagtccccatttaagatagacattggacctgtctacactgtcgatcctgcaaaa 487
Query: 301 aggcatgcctatgcacagggtgataataaagttttcgcacctgttgagagagagttgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aggcatgcctatgcacagggtgataataaagttttcgcacctgttgagagagagttgatt 547
Query: 361 tttgatatagatatgtcagattatgatgatgttagatactgctgctctggtgcggatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttgatatagatatgtcagattatgatgatgttagatactgctgctctggtgcggatgtt 607
Query: 421 tgcttgaactgctggccgttgatgactatagctatcaaagtgattgatacggccttgaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tgcttgaactgctggccgttgatgactatagctatcaaagtgattgatacggccttgaga 667
Query: 481 g 481
|
Sbjct: 668 g 668
>gnl|LJGI|TC75682 similar to UniRef100_A2Y3N8 Cluster: DNA primase; n=2; Oryza
sativa|Rep: DNA primase - Oryza sativa subsp. indica
(Rice), partial (22%)
Length = 607
Score = 583 bits (294), Expect = e-166
Identities = 297/298 (99%)
Strand = Plus / Plus
Query: 1 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 369
Query: 61 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 429
Query: 121 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 489
Query: 181 aatgatatttatctgcggttccaatctttcaacaatgcccttgagctcgaaaactccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatgatatttatctgcggttccaatctttcaacaatgcccttgagctcgaaaactccatc 549
Query: 241 aaagaaaagtccccatttaagatagacattggacctgtctacactgtcgatcctgcaa 298
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 550 aaagaaaagtccccatttaagatagacattggacctgtctacaccgtcgatcctgcaa 607
>gnl|LJGI|FS337574 similar to UniRef100_A2Y3N8 Cluster: DNA primase; n=2; Oryza
sativa|Rep: DNA primase - Oryza sativa subsp. indica
(Rice), partial (14%)
Length = 689
Score = 396 bits (200), Expect = e-110
Identities = 200/200 (100%)
Strand = Plus / Plus
Query: 1 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atgcccaaaatgattactgatcaagaacttgacttcaatcccaattatctcaaactatat 549
Query: 61 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tacggaaagttgtttcctttcactgatatatttagatggatgtcttatggcaatgatggg 609
Query: 121 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aagcaccctggttgtgattcatcctactttggccgaagagagttttcattcactctggaa 669
Query: 181 aatgatatttatctgcggtt 200
||||||||||||||||||||
Sbjct: 670 aatgatatttatctgcggtt 689