Miyakogusa Predicted Gene
- Lj0g3v0104159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0104159.1 Non Chatacterized Hit- tr|I1MG10|I1MG10_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10927
PE,83.85,0,seg,NULL; SEY-1,NULL; GUANYLATE BINDING PROTEIN,NULL;
RHD3,Root hair defective 3 GTP-binding,CUFF.5911.1
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59657 similar to UniRef100_A7QCR6 Cluster: Chromosome... 2266 0.0
gnl|LJGI|FS357417 similar to UniRef100_A7QCR6 Cluster: Chromosom... 480 e-134
gnl|LJGI|BP037952 weakly similar to UniRef100_Q2QMH2 Cluster: Ro... 375 e-103
gnl|LJGI|TC65907 similar to UniRef100_Q3EB66 Cluster: Uncharacte... 62 8e-09
>gnl|LJGI|TC59657 similar to UniRef100_A7QCR6 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(35%)
Length = 1547
Score = 2266 bits (1143), Expect = 0.0
Identities = 1152/1155 (99%)
Strand = Plus / Plus
Query: 1 atgctcgagtttgataaaggatctgctgacgctgctataagacaggccaattggggtgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atgctcgagtttgataaaggatctgctgacgctgctataagacaggccaattggggtgct 78
Query: 61 tcaaaagtgcgagacaaacttcgtcgagatattgattcacacgcttcatctgtgcgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tcaaaagtgcgagacaaacttcgtcgagatattgattcacacgcttcatctgtgcgcagt 138
Query: 121 gcaaaattatcagagataatgactagctttgagacacaactagtcaaggcattggctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gcaaaattatcagagataatgactagctttgagacacaactagtcaaggcattggctgag 198
Query: 181 cctgttgagtccctctttgaagcagggggaaaagacacttggctttctatcagaaaactt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 199 cctgttgagtccctctttgaagctgggggaaaagacacttggctttctatcagaaaactt 258
Query: 241 cttaaacgtgagactgaagctgttgtatcaaaatttttaacttccattgctggttttgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cttaaacgtgagactgaagctgttgtatcaaaatttttaacttccattgctggttttgag 318
Query: 301 cttgatgaagaaacaattgaaagaatgcaacaaaccttaagggaccatggaagaaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttgatgaagaaacaattgaaagaatgcaacaaaccttaagggaccatggaagaaaagtg 378
Query: 361 gtggaaaataaagcaagagaagaagctggaaagattcttattcgcatgaaagataggttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtggaaaataaagcaagagaagaagctggaaagattcttattcgcatgaaagataggttc 438
Query: 421 tccacagtattcaatcatgacagtgattcactacctagggtttggactgggaaggaagat 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 439 tccacagtattcaatcatgacagtggttcactacctagggtttggactgggaaggaagat 498
Query: 481 atcagagcaattacaagggatgctcgctctgcgtcgctgaagcttctatcagatctggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atcagagcaattacaagggatgctcgctctgcgtcgctgaagcttctatcagatctggct 558
Query: 541 gctatacgcctggatgagaagccagatcgtattgaaagtgtacttcattcatcgctcata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gctatacgcctggatgagaagccagatcgtattgaaagtgtacttcattcatcgctcata 618
Query: 601 gataataaaactgttactgcatcatcttcacaatatacaagtagagaagcttctgtggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gataataaaactgttactgcatcatcttcacaatatacaagtagagaagcttctgtggat 678
Query: 661 cctctggcttcaagcacgtgggaggaggtttctcctggaggtgtacttatcactccagtg 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cctctggcttcaggcacgtgggaggaggtttctcctggaggtgtacttatcactccagtg 738
Query: 721 cagtgcaagtctttgtggagacaattccagggtgaaactgagtatactgtcacccaagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cagtgcaagtctttgtggagacaattccagggtgaaactgagtatactgtcacccaagct 798
Query: 781 atttcagctcaggaggcctacaagcgaagtaacaattggttgcctcctccatgggcaatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atttcagctcaggaggcctacaagcgaagtaacaattggttgcctcctccatgggcaatc 858
Query: 841 atggcaatggtcgttcttggttttaatgagttcatgttgcttctaaagaatcctctctac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 atggcaatggtcgttcttggttttaatgagttcatgttgcttctaaagaatcctctctac 918
Query: 901 ctgttggttatatttgttgtttatctagtcgtaaaggccgtttggatacaaatggacata 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ctgttggttatatttgttgtttatctagtcgtaaaggccgtttggatacaaatggacata 978
Query: 961 gctggagagtttcgacatggcgctctacctgggttactctccatttcatcaaagtttctt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gctggagagtttcgacatggcgctctacctgggttactctccatttcatcaaagtttctt 1038
Query: 1021 cccacagtcatgaaccttcttaaacgtctagctgaagaagctcaagggaatccagcacct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 cccacagtcatgaaccttcttaaacgtctagctgaagaagctcaagggaatccagcacct 1098
Query: 1081 caaggaacacaaccacaaagttcagcaactcagatatacagaaatcaagtgcaaaaacct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 caaggaacacaaccacaaagttcagcaactcagatatacagaaatcaagtgcaaaaacct 1158
Query: 1141 gatcgagtatcaagt 1155
|||||||||||||||
Sbjct: 1159 gatcgagtatcaagt 1173
>gnl|LJGI|FS357417 similar to UniRef100_A7QCR6 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 597
Score = 480 bits (242), Expect = e-134
Identities = 242/242 (100%)
Strand = Plus / Minus
Query: 415 aggttctccacagtattcaatcatgacagtgattcactacctagggtttggactgggaag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggttctccacagtattcaatcatgacagtgattcactacctagggtttggactgggaag 183
Query: 475 gaagatatcagagcaattacaagggatgctcgctctgcgtcgctgaagcttctatcagat 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaagatatcagagcaattacaagggatgctcgctctgcgtcgctgaagcttctatcagat 123
Query: 535 ctggctgctatacgcctggatgagaagccagatcgtattgaaagtgtacttcattcatcg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctggctgctatacgcctggatgagaagccagatcgtattgaaagtgtacttcattcatcg 63
Query: 595 ctcatagataataaaactgttactgcatcatcttcacaatatacaagtagagaagcttct 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctcatagataataaaactgttactgcatcatcttcacaatatacaagtagagaagcttct 3
Query: 655 gt 656
||
Sbjct: 2 gt 1
>gnl|LJGI|BP037952 weakly similar to UniRef100_Q2QMH2 Cluster: Root hair defective 3
GTP-binding protein containing protein, expressed; n=1;
Oryza sativa Japonica Group|Rep: Root hair defective 3
GTP-binding protein containing protein, expressed -
Oryza sativa subsp. japonica (Rice), partial (9%)
Length = 365
Score = 375 bits (189), Expect = e-103
Identities = 216/225 (96%)
Strand = Plus / Minus
Query: 287 ttgctggttttgagcttgatgaagaaacaattgaaagaatgcaacaaaccttaagggacc 346
||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 341 ttgctggttttgagcttgatgaagaaacaattgaaagaatgcaaccaagcctaagggacc 282
Query: 347 atggaagaaaagtggtggaaaataaagcaagagaagaagctggaaagattcttattcgca 406
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 281 atggaagaaaagtggtggaaaataaagcaagagaagaagctggaaagattattattcgca 222
Query: 407 tgaaagataggttctccacagtattcaatcatgacagtgattcactacctagggtttgga 466
|||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 221 tgaaggataggttctccacaatattcaatcatgacaatgattcactacctagggtttgga 162
Query: 467 ctgggaaggaagatatcagagcaattacaagggatgctcgctctg 511
|||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 161 ctgggaaggaagatatcagagcaattaccaaggatgctcgctctg 117
>gnl|LJGI|TC65907 similar to UniRef100_Q3EB66 Cluster: Uncharacterized protein
At3g13870.2; n=2; Arabidopsis thaliana|Rep:
Uncharacterized protein At3g13870.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (14%)
Length = 940
Score = 61.9 bits (31), Expect = 8e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 781 atttcagctcaggaggcctacaagcgaagtaacaattggttgcctcctccatgggcaat 839
||||| |||||||||||| ||||||| | |||||| ||||| ||||| |||||||||||
Sbjct: 6 atttctgctcaggaggccaacaagcgcaataacaactggttacctcccccatgggcaat 64