Miyakogusa Predicted Gene
- Lj0g3v0103929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0103929.1 tr|D8RL81|D8RL81_SELML ATP-binding cassette
transporter OS=Selaginella moellendorffii GN=SmABCG24
PE,22.84,0.000000006,ATP-BINDING CASSETTE TRANSPORTER (PDR),NULL;
ATP-BINDING CASSETTE TRANSPORTER,NULL; ABC2_membrane,AB,CUFF.5894.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78548 similar to UniRef100_Q9XIE2 Cluster: Pleiotropi... 844 0.0
gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotrop... 404 e-112
gnl|LJGI|TC70077 similar to UniRef100_Q9XIE2 Cluster: Pleiotropi... 309 1e-83
gnl|LJGI|TC78148 similar to UniRef100_Q9XIE2 Cluster: Pleiotropi... 88 8e-17
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 56 3e-07
gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome... 56 3e-07
>gnl|LJGI|TC78548 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
drug resistance protein 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (10%)
Length = 712
Score = 844 bits (426), Expect = 0.0
Identities = 511/538 (94%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 142 atagcacaggttttcaccgaaataccatatgtgtttgcccaaactgtgttttactcactc 201
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2 atagcacaggttttcaccgaaataccatatgtgtttgcccaaactacgttttactcactc 61
Query: 202 attgtgtatgctatggtgagcttcgagtggaaagtggagaagttcttctggttcttcttt 261
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 62 attgtgtatgctatggtgagcttcgattggaaagtggagaagttcttctggttcttcttt 121
Query: 262 gtcagcttcttctccttcctgtacttcacatattacggtatgatgaccgtgtccatcaca 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtcagcttcttctccttcctgtacttcacatattacggtatgatgaccgtgtccatcaca 181
Query: 322 ccaaatcaccaagtggcatcaatcttcgcagcagcgttctacggactcttcaacctcttc 381
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 182 ccaaatcaccaagtggcatcaatctttgcagcagcgttctacggactcttcaacctcttc 241
Query: 382 tctggcttctttattccaaaacctaaaattcccggatggtggatatggtactactggatc 441
|||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 242 tctggcttctttatcccaagacctaaaattcccggatggtgggtatggtactactggatc 301
Query: 442 tgcccggtcgcatggacagtgtatggattaatcgtttcccaatatagagatgtaacagat 501
||||| || |||||||| ||||||||||| ||||||||||||||||||||| |||| |
Sbjct: 302 tgccctgtagcatggaccgtgtatggattgatcgtttcccaatatagagatataactagt 361
Query: 502 cccatctttgtggctggaagtactcagaatttcactgtcaaggaatatattgaagaccat 561
||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 362 cccatctctgtggctgggagtactcagaatttcactgtcaagggatatattgaggactac 421
Query: 562 tatgggtttaaatctgacttcatgggtccagttgctgcagttttggtccttttcacttgc 621
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tatggctttaaacctgacttcatgggtccagttgctgcagttttggtccttttcacttgt 481
Query: 622 tt-ctttgcctttgtatttgccgtatgcatcaaggtactgaacttccaatccagataa 678
|| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 482 ttcctttgcctttgtatttgccgtctgcatcaaggtcctgaacttccaatccagataa 539
>gnl|LJGI|AI967680 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
drug resistance protein 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (7%)
Length = 360
Score = 404 bits (204), Expect = e-112
Identities = 247/260 (95%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 1 atggtcataggagcattgtatgctgctgttatttttattggaattaacaactgccaaacg 60
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 101 atggtcataggagcattgtatgctgctgttatttttgttggagttaacaactgccaaact 160
Query: 61 gttcaaccagttgtggccattgaaagaactgtattctatagagaaagggctgctgg-aat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 161 gttcaaccagttgtggccattgaaagaactgtattctatagagaaagggctgctggcaat 220
Query: 120 gtatggtcctctgccttatgctatagcacaggttttcaccgaaataccatatgtgtttgc 179
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gtatgctcctctgccttatgccatagcacaggttttcaccgaaataccatatgtgtttgc 280
Query: 180 ccaaactgtgttttactcactcattgtgtatgctatggtgagcttcgagtggaaagtgga 239
|| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 281 cccgactacgttttactcactcattgtgtatgctatggtgagcttcgattggaaagtgga 340
Query: 240 gaagttcttctggttcttct 259
||||||||||||| |||||
Sbjct: 341 caagttcttctggtacttct 360
>gnl|LJGI|TC70077 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
drug resistance protein 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (4%)
Length = 538
Score = 309 bits (156), Expect = 1e-83
Identities = 207/224 (92%)
Strand = Plus / Plus
Query: 455 ggacagtgtatggattaatcgtttcccaatatagagatgtaacagatcccatctttgtgg 514
|||| ||||||||||| ||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 2 ggaccgtgtatggattgatcgtttcccaatatagagatataactagtcccatctctgtgg 61
Query: 515 ctggaagtactcagaatttcactgtcaaggaatatattgaagaccattatgggtttaaat 574
|||| ||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||
Sbjct: 62 ctgggagtactcagaatttcactgtcaagggatatattgaggactattatggctttaaac 121
Query: 575 ctgacttcatgggtccagttgctgcagttttggtccttttcacttgcttctttgcctttg 634
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 122 ccgacttcatgggtccagttgctgcagttttggtccttttcacttgtttctttgcctttg 181
Query: 635 tatttgccgtatgcatcaaggtactgaacttccaatccagataa 678
|||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 182 tatttgccgtctgcatcaaggtcctgaacttccaatccagataa 225
>gnl|LJGI|TC78148 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance
protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic
drug resistance protein 8 - Arabidopsis thaliana
(Mouse-ear cress), partial (6%)
Length = 548
Score = 87.7 bits (44), Expect = 8e-17
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 550 attgaagaccattatgggtttaaatctgacttcatgggtccagttgctgcagttttggtc 609
||||||||||||||||| || ||||| ||||||||||| ||||||||| |||||||||
Sbjct: 167 attgaagaccattatggattcaaatcagacttcatggggccagttgcttgtgttttggtc 226
Query: 610 cttttcacttgcttctttgcctttgtatttgc 641
|||| || |||||||||||||||||||||
Sbjct: 227 gctttccctgtcttctttgcctttgtatttgc 258
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 80 ttgaaagaactgtattctatagagaaagggctgctggaatgtat 123
|||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 645 ttgaaagaacagtcttctatagagaaaaagctgctggaatgtat 688
>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 695
Score = 56.0 bits (28), Expect = 3e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 80 ttgaaagaactgtattctatagagaaagggctgctggaatgtat 123
|||||||||| || ||||||||||||| |||||||||||||||
Sbjct: 137 ttgaaagaacagtcttctatagagaaaaagctgctggaatgtat 180