Miyakogusa Predicted Gene

Lj0g3v0103919.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0103919.1 Non Chatacterized Hit- tr|A9NSV8|A9NSV8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,45.28,3e-17,seg,NULL,CUFF.5904.1
         (471 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58886 similar to UniRef100_A7NYN4 Cluster: Chromosome...   583   e-166

>gnl|LJGI|TC58886 similar to UniRef100_A7NYN4 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 823

 Score =  583 bits (294), Expect = e-166
 Identities = 330/342 (96%)
 Strand = Plus / Plus

                                                                       
Query: 130 actaacaaacctaagaaatcaaagcgaaaaaagaagaacttgtttgaggtggctcaattc 189
           |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 256 actagcaaacctaagaaatcaaagcgaagaaagaagaacttgtttgaggtggctcaattc 315

                                                                       
Query: 190 ttacctacctggggaataggctatcacatggccaagactcattggaaagaaattacttat 249
           ||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| 
Sbjct: 316 ttacctaactggggaatcggctatcatatggccaagactcactggaaagaaattacttac 375

                                                                       
Query: 250 gaaatcacaaaaataaatctctacaaggatgggaaacatggcaaggcatggggcattgct 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaatcacaaaaataaatctctacaaggatgggaaacatggcaaggcatggggcattgct 435

                                                                       
Query: 310 cataaaaatggcttgccaattgcagatccaaagaagatcagtggagttcacaagcgttgt 369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 436 cataaaaatggcttgccaattgcagatccaaagaagatcagtggagttcacaaacgttgt 495

                                                                       
Query: 370 tggaagtacctcccaggtgttgcaaaagcatcagaaagctcaccaaacttaacaagtcct 429
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 496 tggaagtacctcccaggtgtggtaaaagcatcagaaagctcaccaaacttaacaagtcct 555

                                                     
Query: 430 acagacagtggcgaaaaagttgaagtccaagcaagttgatgc 471
            ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 556 gcagacagtggcgaaaaagttgaagtcctagcaagttgatgc 597



 Score =  184 bits (93), Expect = 3e-46
 Identities = 102/105 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaagagctttgggtagcacagttgatggacttcgaaactcttccttactcagattt 60
           |||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 133 atggcaagggcattgggtagcacagttgatggacttcgaaactattccttactcagattt 192

                                                        
Query: 61  tcacttagctttatcagaactctttctacatcttctccatcatct 105
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcacttagctttatcagaactctttctacatcttctccatcatct 237