Miyakogusa Predicted Gene

Lj0g3v0103099.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0103099.1 tr|B9HWJ1|B9HWJ1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_566638 PE=4
SV=1,44.05,0.0000000004,Bromo adjacent homology domain,Bromo adjacent
homology (BAH) domain; BAH,Bromo adjacent homology (BA,gene.g7816.t1.1
         (1335 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU251457 similar to UniRef100_A7Q958 Cluster: Chromosom...   771   0.0  

>gnl|LJGI|AU251457 similar to UniRef100_A7Q958 Cluster: Chromosome chr19 scaffold_66,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_66, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 389

 Score =  771 bits (389), Expect = 0.0
 Identities = 389/389 (100%)
 Strand = Plus / Plus

                                                                        
Query: 892  ctttcttgcttgcaccttgattctaaccagaagccagagaagagcaacaaccttgcaaga 951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctttcttgcttgcaccttgattctaaccagaagccagagaagagcaacaaccttgcaaga 60

                                                                        
Query: 952  gaagatgaggatttgggcgtaggtgatgatgcaaagttgggagccaagaggagcagaagt 1011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gaagatgaggatttgggcgtaggtgatgatgcaaagttgggagccaagaggagcagaagt 120

                                                                        
Query: 1012 gatagggggtctcctcagtctcggattggtcggcggggagttaggaagttaattagaagt 1071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gatagggggtctcctcagtctcggattggtcggcggggagttaggaagttaattagaagt 180

                                                                        
Query: 1072 gagcaaatgatggtacacgagatgttccaggttgtaaattatggtagcccagatcagaga 1131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gagcaaatgatggtacacgagatgttccaggttgtaaattatggtagcccagatcagaga 240

                                                                        
Query: 1132 ttgctttctctgaaacagattgaattccaaccttggaataaccccacatacaaggttgat 1191
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttgctttctctgaaacagattgaattccaaccttggaataaccccacatacaaggttgat 300

                                                                        
Query: 1192 gacaagatagagttgctctgtcaggatagtggcatcagaggttgctggttcaggtgcaca 1251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gacaagatagagttgctctgtcaggatagtggcatcagaggttgctggttcaggtgcaca 360

                                         
Query: 1252 gttgtgcaggtagcccggaaacagttgaa 1280
            |||||||||||||||||||||||||||||
Sbjct: 361  gttgtgcaggtagcccggaaacagttgaa 389