Miyakogusa Predicted Gene
- Lj0g3v0103049.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0103049.1 Non Chatacterized Hit- tr|A3BAF3|A3BAF3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,40,1e-18,seg,NULL; DUF4228,Protein of unknown function
DUF4228,CUFF.5821.1
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60117 similar to UniRef100_Q6NLC8 Cluster: Uncharacte... 1291 0.0
gnl|LJGI|BP085112 121 6e-27
>gnl|LJGI|TC60117 similar to UniRef100_Q6NLC8 Cluster: Uncharacterized protein
At1g66480; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g66480 - Arabidopsis thaliana
(Mouse-ear cress), partial (39%)
Length = 893
Score = 1291 bits (651), Expect = 0.0
Identities = 651/651 (100%)
Strand = Plus / Plus
Query: 1 atgggaaacacaattggaagaagcaaaagagcaaaagtgatgaaggttgatggagaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atgggaaacacaattggaagaagcaaaagagcaaaagtgatgaaggttgatggagaaacc 92
Query: 61 ttcaaagtgaagatgccagccactgcaaacgacgtagtaaaagactaccccggtcacgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttcaaagtgaagatgccagccactgcaaacgacgtagtaaaagactaccccggtcacgtt 152
Query: 121 ctccttgattcccaagcggtgaagcattttgggcttcgggccaggccacttgagcccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctccttgattcccaagcggtgaagcattttgggcttcgggccaggccacttgagcccaac 212
Query: 181 caagagctcaagcccaagaaaatctacttcgtggtggagttaccgaaagttcaggaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caagagctcaagcccaagaaaatctacttcgtggtggagttaccgaaagttcaggaacca 272
Query: 241 gaggaggtaaaaacggcgtcgtcgtcgtcactgccgaggagggtgcgatccagtggtata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gaggaggtaaaaacggcgtcgtcgtcgtcactgccgaggagggtgcgatccagtggtata 332
Query: 301 cagggcatgaaagctaaggataggctcgagctattgatgctctcgaaacgctccgtttcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cagggcatgaaagctaaggataggctcgagctattgatgctctcgaaacgctccgtttcg 392
Query: 361 gaccttgcacttgtgaggcagccaacgacgaacgtgggcctggatgggcccatgagagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaccttgcacttgtgaggcagccaacgacgaacgtgggcctggatgggcccatgagagtt 452
Query: 421 aagatgaggctgcctagggcccagctggagaagcttatggaggagagcaacgacggcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aagatgaggctgcctagggcccagctggagaagcttatggaggagagcaacgacggcact 512
Query: 481 gaggtggcggagaagattatgaggttgtacgccggcgagggtggtggtgatgtgtcggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaggtggcggagaagattatgaggttgtacgccggcgagggtggtggtgatgtgtcggcg 572
Query: 541 gatgatggtggagtgagggtatcgcaccatcatggtcacaaaccacgtgggaaacgggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gatgatggtggagtgagggtatcgcaccatcatggtcacaaaccacgtgggaaacgggtg 632
Query: 601 agttttagcccaatggaaaatgaagttctagaagaagcagttcctcaatag 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agttttagcccaatggaaaatgaagttctagaagaagcagttcctcaatag 683
>gnl|LJGI|BP085112
Length = 247
Score = 121 bits (61), Expect = 6e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 591 gaaacgggtgagttttagcccaatggaaaatgaagttctagaagaagcagttcctcaata 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaaacgggtgagttttagcccaatggaaaatgaagttctagaagaagcagttcctcaata 155
Query: 651 g 651
|
Sbjct: 154 g 154