Miyakogusa Predicted Gene
- Lj0g3v0103029.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0103029.1 Non Chatacterized Hit- tr|I1LVC4|I1LVC4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26386 PE,75.79,0,ATP
BINDING / DNA BINDING / HELICASE,NULL; SWI/SNF-RELATED
MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULAT,CUFF.5824.1
(955 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome... 652 0.0
gnl|LJGI|TC81005 similar to UniRef100_A7NXX0 Cluster: Chromosome... 559 e-158
gnl|LJGI|TC71927 similar to UniRef100_A7NXX0 Cluster: Chromosome... 268 6e-71
gnl|LJGI|TC78700 similar to UniRef100_A7P7U3 Cluster: Chromosome... 153 2e-36
>gnl|LJGI|TC78397 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 925
Score = 652 bits (329), Expect = 0.0
Identities = 452/493 (91%)
Strand = Plus / Plus
Query: 429 agatggggtgaagtcaaaattcttcctgaacattctaaacttgtgtgaatcatctgggga 488
|||||| |||||||| ||||||||| |||||||||||||||||||||| ||||| ||
Sbjct: 5 agatggagtgaagtcgaaattcttcatgaacattctaaacttgtgtgattcatccaacga 64
Query: 489 gaagcttctggtgttcagccaatatctcttaccaatgagatttttagagaggttagttat 548
||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||
Sbjct: 65 gaagcttctggtgttcagccaatatctcttacctttgaaatatttagagaggttagttat 124
Query: 549 gaaaaggaaaggttggagtgttgggaaagaaatcttcgaaatctcaggggattctagctc 608
|||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||||
Sbjct: 125 gaaatggaaaggttggagttttgggaaagaaatcttcggaatctcaggggaatctagctc 184
Query: 609 tgagcaaagggagttgtccatgtacaaattcaacaattcacctgatgccaaagtcttatt 668
|||||||||||||| ||||||| | ||||||||||||||||| ||||| ||| | || ||
Sbjct: 185 tgagcaaagggagtggtccatgaataaattcaacaattcaccggatgctaaaattttctt 244
Query: 669 tggctcaatcaaggcttgtggagagggcatatccttggttggggcatcccgagtacttgt 728
||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct: 245 tggttcaatcaaggcttgtggagagggtatatctttggttggggcatcccgagtacttat 304
Query: 729 tttggatgttcatctgaacccatcagttactcgtcaagctattggccgtgcattccgacc 788
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 305 tttggatgttcatctgaacccgtcagttactcgtcaagctattggtcgtgcatttcgacc 364
Query: 789 agggcagacaaagaaggtctttgtgtatcgattgatagctgctgattctcacgaagagga 848
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 365 aggacagacaaagaaggtctttgtgtatcgattgatagctgctgattctccggaagagga 424
Query: 849 tgatcacctgacttgtttcaagaaggaatcaatttctaagatgtggtttgaatggaatga 908
||||||| | ||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct: 425 tgatcacattacttgtttcaagaaggaattgatttcaaagatgtggtttgagtggaatga 484
Query: 909 gtattgtggtgat 921
||| |||||||||
Sbjct: 485 gtactgtggtgat 497
>gnl|LJGI|TC81005 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 715
Score = 559 bits (282), Expect = e-158
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 674 caatcaaggcttgtggagagggcatatccttggttggggcatcccgagtacttgttttgg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatcaaggcttgtggagagggcatatccttggttggggcatcccgagtacttgttttgg 60
Query: 734 atgttcatctgaacccatcagttactcgtcaagctattggccgtgcattccgaccagggc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgttcatctgaacccatcagttactcgtcaagctattggccgtgcattccgaccagggc 120
Query: 794 agacaaagaaggtctttgtgtatcgattgatagctgctgattctcacgaagaggatgatc 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacaaagaaggtctttgtgtatcgattgatagctgctgattctcacgaagaggatgatc 180
Query: 854 acctgacttgtttcaagaaggaatcaatttctaagatgtggtttgaatggaatgagtatt 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acctgacttgtttcaagaaggaatcaatttctaagatgtggtttgaatggaatgagtatt 240
Query: 914 gtggtgatcaagctttcaaggttgagaacgtcagtgtgaaag 955
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtggtgatcaagctttcaaggttgagaacgtcagtgtgaaag 282
>gnl|LJGI|TC71927 similar to UniRef100_A7NXX0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 588
Score = 268 bits (135), Expect = 6e-71
Identities = 171/183 (93%)
Strand = Plus / Plus
Query: 739 catctgaacccatcagttactcgtcaagctattggccgtgcattccgaccagggcagaca 798
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 catctgaatccatcagttactcgtcaagctattggccgtgcattccgaccaggacagaca 60
Query: 799 aagaaggtctttgtgtatcgattgatagctgctgattctcacgaagaggatgatcacctg 858
||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |
Sbjct: 61 aagaaggtctttgtgtatcgattgatagctgctgactctccagaagaggacgatcacatt 120
Query: 859 acttgtttcaagaaggaatcaatttctaagatgtggtttgaatggaatgagtattgtggt 918
||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct: 121 acttgtttcaagaaggaattgatttcaaagatgtggtttgaatggaatgagtactgtggt 180
Query: 919 gat 921
|||
Sbjct: 181 gat 183
>gnl|LJGI|TC78700 similar to UniRef100_A7P7U3 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 533
Score = 153 bits (77), Expect = 2e-36
Identities = 107/117 (91%)
Strand = Plus / Plus
Query: 805 gtctttgtgtatcgattgatagctgctgattctcacgaagaggatgatcacctgacttgt 864
|||||||||||||||||||||||||||||||||| |||||||| |||||| | ||||||
Sbjct: 1 gtctttgtgtatcgattgatagctgctgattctccggaagaggacgatcacattacttgt 60
Query: 865 ttcaagaaggaatcaatttctaagatgtggtttgaatggaatgagtattgtggtgat 921
||||||||||||| ||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 61 ttcaagaaggaattgatttcaaagatgtggtttgagtggaatgagtactgtggtgat 117