Miyakogusa Predicted Gene
- Lj0g3v0102859.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0102859.1 tr|G7JW79|G7JW79_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_5g022040 PE=4 SV=1,42.75,2e-18,
,CUFF.5804.1
(414 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66866 821 0.0
gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-ty... 250 6e-66
gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1;... 196 8e-50
gnl|LJGI|TC59897 105 2e-22
>gnl|LJGI|TC66866
Length = 1034
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1 atgaaggaatatggtttcaaagaatcgtggactaagattttcagctttgatactatgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgaaggaatatggtttcaaagaatcgtggactaagattttcagctttgatactatgagc 382
Query: 61 agttatcgctggccttttggtggattatattggccagtaaaacactttaagaatggttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agttatcgctggccttttggtggattatattggccagtaaaacactttaagaatggttct 442
Query: 121 gctatattgatgtatcattcctacaatttctttatctactatgaacctggaaaggatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gctatattgatgtatcattcctacaatttctttatctactatgaacctggaaaggatgga 502
Query: 181 ttcaaaatttttaaagttcgtgggactcaatcaagatttgatgttattcctcatattcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttcaaaatttttaaagttcgtgggactcaatcaagatttgatgttattcctcatattcct 562
Query: 241 agttttatctcgctgaaagatgttgtgaaaggagacaatattgaggtgctgaatgtgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agttttatctcgctgaaagatgttgtgaaaggagacaatattgaggtgctgaatgtgcac 622
Query: 301 tcaaggtatgaggagttcaaatttatggaagaaaatgcagatcttttcttggctaaagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcaaggtatgaggagttcaaatttatggaagaaaatgcagatcttttcttggctaaagtg 682
Query: 361 aacgacaaagtgggaatattatacaccatatcaactgatgatgaagaatagggt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aacgacaaagtgggaatattatacaccatatcaactgatgatgaagaatagggt 736
>gnl|LJGI|BP043760 similar to UniRef100_P37938 Cluster: Mating-type protein A-alpha
Z4; n=1; Schizophyllum commune|Rep: Mating-type protein,
partial (1%)
Length = 506
Score = 250 bits (126), Expect = 6e-66
Identities = 213/242 (88%)
Strand = Plus / Minus
Query: 66 tcgctggccttttggtggattatattggccagtaaaacactttaagaatggttctgctat 125
||||||||||| |||||| |||| |||||||||| |||| ||||| |||||| |||||||
Sbjct: 506 tcgctggccttgtggtggtttatgttggccagtacaacaatttaaaaatggtgctgctat 447
Query: 126 attgatgtatcattcctacaatttctttatctactatgaacctggaaaggatggattcaa 185
||||||||||||||| |||||| |||||||||| ||||||||| |||| || |||||||
Sbjct: 446 gttgatgtatcattccgacaattgctttatctaccatgaacctgaaaagcatagattcaa 387
Query: 186 aatttttaaagttcgtgggactcaatcaagatttgatgttattcctcatattcctagttt 245
| ||||||| |||||||||||||||||| |||||| |||||||||||| || | | |||
Sbjct: 386 actttttaaggttcgtgggactcaatcatcatttgaggttattcctcatttttccaattt 327
Query: 246 tatctcgctgaaagatgttgtgaaaggagacaatattgaggtgctgaatgtgcactcaag 305
||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 326 catctcattgaaggatgctgtgaaaggagacaatattgaggtgctgaatgtccactcaag 267
Query: 306 gt 307
||
Sbjct: 266 gt 265
>gnl|LJGI|TC69956 similar to UniRef100_A7Z3J5 Cluster: PenP; n=1; Bacillus
amyloliquefaciens FZB42|Rep: PenP - Bacillus
amyloliquefaciens (strain FZB42), partial (5%)
Length = 1185
Score = 196 bits (99), Expect = 8e-50
Identities = 233/278 (83%), Gaps = 6/278 (2%)
Strand = Plus / Plus
Query: 85 ttatattggccagtaaaacactttaagaatggttctgctatattgatgtatcattcctac 144
|||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| | |
Sbjct: 782 ttatattggccagtaaaacactttcagaatggtgctgctttattgatgtatcattcttgc 841
Query: 145 aatttctttatctactatgaacctggaaaggatggattcaaaatttttaaagttcgtggg 204
|||| |||||||||||||||||||| || | ||||||||| | ||||||| ||||||||
Sbjct: 842 aattgctttatctactatgaacctgaaaggtatggattcagattttttaaggttcgtgg- 900
Query: 205 actcaatcaagatttgatgttattcctcatattcctagttttatctcgctgaaagatgtt 264
||||| |||||| | | |||||||| |||||||| ||||||| || || | || |
Sbjct: 901 -----atcaaaatttgaggctgttcctcatgttcctagtcttatctcactaaagggtgct 955
Query: 265 gtgaaaggagacaatattgaggtgctgaatgtgcactcaaggtatgaggagttcaaattt 324
||||||||||| |||||||||||| ||||||| |||||||||| ||| ||| | |||||
Sbjct: 956 gtgaaaggagataatattgaggtgatgaatgtccactcaaggtgtgaagaggtgaaattg 1015
Query: 325 atggaagaaaatgcagatcttttcttggctaaagtgaa 362
|||||||| | || || ||||||||||| ||||||
Sbjct: 1016 caagaagaaaaagaagttcctttcttggctatagtgaa 1053
>gnl|LJGI|TC59897
Length = 761
Score = 105 bits (53), Expect = 2e-22
Identities = 137/165 (83%)
Strand = Plus / Plus
Query: 1 atgaaggaatatggtttcaaagaatcgtggactaagattttcagctttgatactatgagc 60
|||||||| |||||| | ||||||| ||||||| | ||||||| ||||||||||||
Sbjct: 31 atgaaggactatggtgttgaagaatcatggactagggctttcagcattgatactatgata 90
Query: 61 agttatcgctggccttttggtggattatattggccagtaaaacactttaagaatggttct 120
|| ||| | ||||||| |||||| ||||||||||| ||| || | ||||||| | | ||
Sbjct: 91 agatattgttggccttatggtggtttatattggcctgtacaaaaatttaagagtcctgct 150
Query: 121 gctatattgatgtatcattcctacaatttctttatctactatgaa 165
||||||||| |||||||||| | ||||| ||||||||||||||||
Sbjct: 151 gctatattgttgtatcattcatccaattgctttatctactatgaa 195