Miyakogusa Predicted Gene
- Lj0g3v0102809.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0102809.1 Non Chatacterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.04,0.000000001,seg,NULL; Occludin_ELL,Occludin/RNA
polymerase II elongation factor, ELL domain,CUFF.5801.1
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67890 similar to UniRef100_A7P6U5 Cluster: Chromosome... 955 0.0
gnl|LJGI|BP056243 similar to UniRef100_A7P6U5 Cluster: Chromosom... 400 e-111
gnl|LJGI|TC73476 similar to UniRef100_A7P6U5 Cluster: Chromosome... 363 1e-99
gnl|LJGI|BP075701 52 7e-06
>gnl|LJGI|TC67890 similar to UniRef100_A7P6U5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (11%)
Length = 692
Score = 955 bits (482), Expect = 0.0
Identities = 485/486 (99%)
Strand = Plus / Plus
Query: 553 aaagaaagtaaaagacaaacacctaattcattggaagcggtggctgatggaggaaaggat 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagaaagtaaaagacaaacacctaattcattggaagcggtggctgatggaggaaaggat 60
Query: 613 tctgtgtttgcagcaagaaataatatcgaacaaaggaagagagaatcttcttcagatgaa 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgtgtttgcagcaagaaataatatcgaacaaaggaagagagaatcttcttcagatgaa 120
Query: 673 aatagctgctcttattcaaagtacgaaaaagatgaacctgaattgaaggggcctataatg 732
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatagctgctcttgttcaaagtacgaaaaagatgaacctgaattgaaggggcctataatg 180
Query: 733 actttttcacaatataaagaatatgtgcaggagtatggtgataaatatgatagttactgc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actttttcacaatataaagaatatgtgcaggagtatggtgataaatatgatagttactgc 240
Query: 793 tccctgtacaagattttggagagttacaggaatgagtttcaacaactaggagatgattta 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccctgtacaagattttggagagttacaggaatgagtttcaacaactaggagatgattta 300
Query: 853 gtatatgctaaaggcagggatatggatagatattatgacatcttagaacagctgaaggaa 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatatgctaaaggcagggatatggatagatattatgacatcttagaacagctgaaggaa 360
Query: 913 tcctatcgtcgttgtggaccaagacataagagactgaagaaaatatttgttgtgcttcac 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcctatcgtcgttgtggaccaagacataagagactgaagaaaatatttgttgtgcttcac 420
Query: 973 caagaactagagaatatcaagctaaggatcaaagactttgcccactcatatagtaaagag 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caagaactagagaatatcaagctaaggatcaaagactttgcccactcatatagtaaagag 480
Query: 1033 tgaaaa 1038
||||||
Sbjct: 481 tgaaaa 486
>gnl|LJGI|BP056243 similar to UniRef100_A7P6U5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 445
Score = 400 bits (202), Expect = e-111
Identities = 231/241 (95%), Gaps = 6/241 (2%)
Strand = Plus / Minus
Query: 804 gattttggagagttacaggaatgagtttcaacaactaggagatgatttagtatatgctaa 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gattttggagagttacaggaatgagtttcaacaactaggagatgatttagtatatgctaa 386
Query: 864 aggcagggatatggatagatattatgacatcttagaacagctgaaggaatcctatcgtcg 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcagggatatggatagatattatgacatcttagaacagctgaaggaatcctatcgtcg 326
Query: 924 ttgtggacc------aagacataagagactgaagaaaatatttgttgtgcttcaccaaga 977
||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 ttgtggacccttgcagagacataagagactgaagaaaatatttgttgtgcttcacccaga 266
Query: 978 actagagaatatcaagctaaggatcaaagactttgcccactcatatagtaaagagtgaaa 1037
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 actagagaatatccagctaaggatccaagactttgcccactcatatagtaaagagtgaaa 206
Query: 1038 a 1038
|
Sbjct: 205 a 205
>gnl|LJGI|TC73476 similar to UniRef100_A7P6U5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 480
Score = 363 bits (183), Expect = 1e-99
Identities = 245/266 (92%), Gaps = 6/266 (2%)
Strand = Plus / Plus
Query: 773 ataaatatgatagttactgctccctgtacaagattttggagagttacaggaatgagtttc 832
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 1 ataaatatgatagttactgctccctgcacaagattttggagagttacaggaacgagtttc 60
Query: 833 aacaactaggagatgatttagtatatgctaaaggcagggatatggatagatattatgaca 892
|| |||||||||| | |||| |||||||||||||| ||||||||||||||||||
Sbjct: 61 aaaaactaggagacaaattagaatatgctaaaggca------tggatagatattatgaca 114
Query: 893 tcttagaacagctgaaggaatcctatcgtcgttgtggaccaagacataagagactgaaga 952
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 115 tcgtagaacagctgaaggaatcctatcgtcgttgtggaccaagacacaagagactgaaga 174
Query: 953 aaatatttgttgtgcttcaccaagaactagagaatatcaagctaaggatcaaagactttg 1012
|||||||||||||||||||||| ||||| |||||||| |||| |||||||||||||| ||
Sbjct: 175 aaatatttgttgtgcttcaccaggaactggagaatattaagcaaaggatcaaagactatg 234
Query: 1013 cccactcatatagtaaagagtgaaaa 1038
|||||||||||| |||||||||||||
Sbjct: 235 cccactcatatactaaagagtgaaaa 260
>gnl|LJGI|BP075701
Length = 274
Score = 52.0 bits (26), Expect = 7e-06
Identities = 52/58 (89%), Gaps = 2/58 (3%)
Strand = Plus / Minus
Query: 982 gagaatatcaagctaaggatcaaagactt-tgcccactcatatagtaaagagtgaaaa 1038
|||||||| |||| ||||||||| |||| |||||||||||||| |||||||||||||
Sbjct: 269 gagaatattaagccaaggatcaa-gactaatgcccactcatatactaaagagtgaaaa 213