Miyakogusa Predicted Gene

Lj0g3v0102549.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0102549.1 tr|A9SRP5|A9SRP5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_187673,30.8,8e-19,seg,NULL,CUFF.5791.1
         (843 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59996 similar to UniRef100_A7P5I8 Cluster: Chromosome...  1059   0.0  

>gnl|LJGI|TC59996 similar to UniRef100_A7P5I8 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 735

 Score = 1059 bits (534), Expect = 0.0
 Identities = 537/538 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggcaaagaaaccgaaatcctctctcgcctcgccgcgaaccacctccacctcgcccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atgggcaaagaaaccgaaatcctctctcgcctcgccgcgaaccacctccacctcgcccaa 257

                                                                       
Query: 61  ttcgaacccctccgagccgttctcctcgccctccgatcccgagaccgcgacctcgcccgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttcgaacccctccgagccgttctcctcgccctccgatcccgagaccgcgacctcgcccgc 317

                                                                       
Query: 121 gatattctccaaaccatcgtcgctcgatcgggccggttccccaacatcgcctggtccacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gatattctccaaaccatcgtcgctcgatcgggccggttccccaacatcgcctggtccacc 377

                                                                       
Query: 181 tcttgcccctccccggctcacctcacctacctgtcaacgctcgagttgctgcaattcgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcttgcccctccccggctcacctcacctacctgtcaacgctcgagttgctgcaattcgac 437

                                                                       
Query: 241 ggtgatgcttcctccgcgtggagtttcgaccccgaaacgctgcggttacgcgccgagttc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 438 ggtgatgcttcctccgcgtggagtttcgaccccgaaacgctgcggttacgcgccgagttt 497

                                                                       
Query: 301 ttgttactggttcagaatttgatcgacctagtgtcggagaatgagggtttattggacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttgttactggttcagaatttgatcgacctagtgtcggagaatgagggtttattggacaaa 557

                                                                       
Query: 361 gatggaggtgaatgggaaatgtgtagaagagtgttggataggggtatggagttgggtgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gatggaggtgaatgggaaatgtgtagaagagtgttggataggggtatggagttgggtgtg 617

                                                                       
Query: 421 aagaggctgagtgtggatgaggatggtggtgggagcgagaggagtgagactagtgttgct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagaggctgagtgtggatgaggatggtggtgggagcgagaggagtgagactagtgttgct 677

                                                                     
Query: 481 ccggttgaagaagacgagttgatgagtttgcggaagctggttttgaaccatgcggata 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ccggttgaagaagacgagttgatgagtttgcggaagctggttttgaaccatgcggata 735